Gene PMN2A_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0001 
SymboldnaA 
ID3605388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp550495 
End bp551895 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content38% 
IMG OID637686855 
Productchromosomal replication initiation protein 
Protein accessionYP_291196 
Protein GI72381841 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGTGC CAACTCGGGA TGAGCTATGG ACGAAGGTGC AGCAATTACT GCAAAAGAAT 
TTAAGTAAGC CTTCATATGA GACATGGATA CGTCCGGCTG AATTCTTTGA TTTCAAAGAT
GGATGCTTGA CTTTGATTGC TCCAAATAGT TTCTCAAGTG ATTGGTTAAG GAAAAATTAC
TCTCAAACAA TTGAGGAGAT TGCATCAGAG ATATTTGGCC ATGAAGTTAA AGTATGTATA
AAAGTTAAGG AAGAATTTTC ATCAAACAAA AGCAATAAGA AAAAGAATTA TTCAAATGTA
GAAGCAAATT CTATTGCCAC TAGTGAGAAT TACGACGTTA AATCTAAACA AACTCAAATA
AAAAAATTTT TACCGAGTTT GAATCTTCGA TATGTTTTTA ATAGATTTGT TGTTGGTCCT
AATAGCCGGA TGGCTCATGC TGCTGCAATG GCAGTAGCCG AGGCCCCTGG TCGGGAATTT
AATCCATTAT TTATTTGTGG GGGGGTTGGC CTAGGTAAAA CACATCTAAT GCAATCTATA
GGTCATTACA GGTTGGAAAT CGATCCAGGA GCAAAGGTTG CATATGTTTC TACTGAGACT
TTTACCAATG ATTTAATAGT TGCAATCAGA AAAGATGGAA TGCAAGCTTT CAGAAATAGA
TATAGAGAAG CTGATTTGAT TTTGGTTGAC GATATTCAAT TTATAGAAGG TAAGGAATAT
ACTCAGGAAG AATTCTTCCA TACATTTAAT GCTTTGCATG AGGCAGGCAG GCAAATTGTT
CTTACAAGTG ATAGGCCTCC AAGTCAAATA CCTCGTTTAC AAGAACGATT GATTTCAAGA
TTCTCAATGG GACTAATTGC AGATATCCAA GCGCCCGATT TGGAGACGAG AATGGCAATA
TTACAAAAAA AAGCTGAGCA TGAAAGAATG CGTTTGCCAA GAGATTTGAT TCAGTTTATT
GCTGGACGAT TCACTTCTAA TATAAGAGAG TTAGAGGGAG CGTTTACTCG TGCTGTCGCA
TTTGCCTCTA TAACTGGGTT GCCAATGACA GTGGAATCAG TAGCACCAAT GCTTGATCCT
ACTGGACAAG GAGTAGAAGT TAAGCCTAAG CAAGTACTAG AAAAAGTAGC TGAGGTCTTT
GGAGTTACCG AGGAGGAAAT GCGTAGTCCA AGTAGACGTA GGCCTGTTAG TCAGGCAAGA
CAGGTAGGCA TGTATTTAAT GCGTCATGGG ACAGATTTAA GTCTTCCTCG TATTGGAGAA
TCTTTTGGGG GAAAGGACCA TACAACAGTT ATGTATGCCA TTGAACAAGT AGAAAAAAAA
TTATCAAGTG AGCCACAATT AGCAAGTCAA GTTCAAAAAG TTAAGGATCT TCTTCAGATC
GATTCACGGA AACGTCGTTA A
 
Protein sequence
MPVPTRDELW TKVQQLLQKN LSKPSYETWI RPAEFFDFKD GCLTLIAPNS FSSDWLRKNY 
SQTIEEIASE IFGHEVKVCI KVKEEFSSNK SNKKKNYSNV EANSIATSEN YDVKSKQTQI
KKFLPSLNLR YVFNRFVVGP NSRMAHAAAM AVAEAPGREF NPLFICGGVG LGKTHLMQSI
GHYRLEIDPG AKVAYVSTET FTNDLIVAIR KDGMQAFRNR YREADLILVD DIQFIEGKEY
TQEEFFHTFN ALHEAGRQIV LTSDRPPSQI PRLQERLISR FSMGLIADIQ APDLETRMAI
LQKKAEHERM RLPRDLIQFI AGRFTSNIRE LEGAFTRAVA FASITGLPMT VESVAPMLDP
TGQGVEVKPK QVLEKVAEVF GVTEEEMRSP SRRRPVSQAR QVGMYLMRHG TDLSLPRIGE
SFGGKDHTTV MYAIEQVEKK LSSEPQLASQ VQKVKDLLQI DSRKRR