| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_3091 |
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| Symbol | |
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| ID | 3581359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 3612408 |
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| End bp | 3613763 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637686828 |
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| Product | multi anti extrusion protein MatE |
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| Protein accession | YP_291147 |
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| Protein GI | 72163490 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.170605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGTC TGAGCACTAC GGCGCCGTTC CGGCATCCTC GGGACACCGA AATCTTCCGG
CTCGCCATTC CCACGTTCTT CGCGCTCGTC TCCGAGCCGC TGTTCCTCCT CACCGACTCC
GCGGTGGTCG GCAGTCTCGG CACCGCGGCA CTCGGCGGCC TGGGCGTGGC CAGCCAAATC
CTGTTGACCT TCGCCAACCT GTGCATCTTC CTCGCCTACG GCACCACGGC TGCGGTCTCC
CGCCGGTTCG GCGCCGGGCA GATCGCCCTC GGACTACGCC ACGGCATCGA CGGAGTATGG
CTGGCCGTCC TCATCGCCGC CACCGCCATC ACCCTGGGCT GGCCGCTGTC CCCCCTCCTC
ATCGACGCTT TGGGCGCCTC CCCGACCGTC GCCCCGTATG CACTCACCTA CCTGCGGATC
AGCCTGCTCA GCCTGCCCGG CCTGCTGATC ATCATGGCGG GCACCGGGGT GCTGCGCGGC
CTGCAGAACG CCCGCATCCC CCTGTTCGTG ACGGTCAGCG CAAACCTCGC CAACATCGTG
CTGAGCATGC TGTTCGTGTG GGGCCTGGGC TGGGGGATCG CCGGATCCGC GTGGGCCACG
GTCGTCGCGC AGAGCGGCGG TGCAGCCATC TACCTGGTGG TGCTGGTCCG CGCCGCGCAA
CGCCACGGTG TCTCGTTCGC GCCCACCCGG TCCGGGCTGC GTGACGCGGC AGCCTCCGGG
TTCGCGCTGT TCATCCGCAC CGTGTCGCTT CGCGCAGTCC TTGTCGTCAC CACCGCGATC
GCGGCCCGTC TCGGCGACCC GGAGATCGCC GCCCACCAAG TGGTGTTCCA ACTCTGGTCG
CTGCTGGTTT TCGCGCTGGA CGCGATCGCC ATCGCAGGCC AGTCGATTGT CGGCCGCTAC
CTGGGGGCCT CGGACGTGCC CGGCGCCCGC GAAGTCACCC GCCGAATGGT GGAGTGGGGG
ATCATGATCG GCGCCGTCTT CACCGTGCTC GTCCTCGCGG TACGCCCCTG GGCGTGGATC
CCGTTCACCG ACGACCCGCA CGTGCGCGAC CTCATCCTCG CCGCGCTGAT CGTCGTCGCG
CTGCTGCAGC CGCTGAGCGG GGTCGTGATG GTCCTCGACG GGATCCTGAT GGGCGCTGGA
GACCAGCGCT ACCTGGCCTG GGCGAGCCTG TGGACCATGC TGATCTTCCT GCCCTGCGCT
GCCCTGGTCC CCCTCTTCGC CGTCCCCGGA TCCGTCACCG GCCTTGTCCT GCTGTGGTCG
GCCTTCGGAG TGTGGATCGC GGCACGCGGA GTGTTCCTGG GCGTCCGGGC TTCCGGGACC
GCGTGGCTCG TCACCGGGGC CGGATCCCCG CGGTAA
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| Protein sequence | MARLSTTAPF RHPRDTEIFR LAIPTFFALV SEPLFLLTDS AVVGSLGTAA LGGLGVASQI
LLTFANLCIF LAYGTTAAVS RRFGAGQIAL GLRHGIDGVW LAVLIAATAI TLGWPLSPLL
IDALGASPTV APYALTYLRI SLLSLPGLLI IMAGTGVLRG LQNARIPLFV TVSANLANIV
LSMLFVWGLG WGIAGSAWAT VVAQSGGAAI YLVVLVRAAQ RHGVSFAPTR SGLRDAAASG
FALFIRTVSL RAVLVVTTAI AARLGDPEIA AHQVVFQLWS LLVFALDAIA IAGQSIVGRY
LGASDVPGAR EVTRRMVEWG IMIGAVFTVL VLAVRPWAWI PFTDDPHVRD LILAALIVVA
LLQPLSGVVM VLDGILMGAG DQRYLAWASL WTMLIFLPCA ALVPLFAVPG SVTGLVLLWS
AFGVWIAARG VFLGVRASGT AWLVTGAGSP R
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