Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_3091 |
Symbol | |
ID | 3581359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 3612408 |
End bp | 3613763 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637686828 |
Product | multi anti extrusion protein MatE |
Protein accession | YP_291147 |
Protein GI | 72163490 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.170605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGTC TGAGCACTAC GGCGCCGTTC CGGCATCCTC GGGACACCGA AATCTTCCGG CTCGCCATTC CCACGTTCTT CGCGCTCGTC TCCGAGCCGC TGTTCCTCCT CACCGACTCC GCGGTGGTCG GCAGTCTCGG CACCGCGGCA CTCGGCGGCC TGGGCGTGGC CAGCCAAATC CTGTTGACCT TCGCCAACCT GTGCATCTTC CTCGCCTACG GCACCACGGC TGCGGTCTCC CGCCGGTTCG GCGCCGGGCA GATCGCCCTC GGACTACGCC ACGGCATCGA CGGAGTATGG CTGGCCGTCC TCATCGCCGC CACCGCCATC ACCCTGGGCT GGCCGCTGTC CCCCCTCCTC ATCGACGCTT TGGGCGCCTC CCCGACCGTC GCCCCGTATG CACTCACCTA CCTGCGGATC AGCCTGCTCA GCCTGCCCGG CCTGCTGATC ATCATGGCGG GCACCGGGGT GCTGCGCGGC CTGCAGAACG CCCGCATCCC CCTGTTCGTG ACGGTCAGCG CAAACCTCGC CAACATCGTG CTGAGCATGC TGTTCGTGTG GGGCCTGGGC TGGGGGATCG CCGGATCCGC GTGGGCCACG GTCGTCGCGC AGAGCGGCGG TGCAGCCATC TACCTGGTGG TGCTGGTCCG CGCCGCGCAA CGCCACGGTG TCTCGTTCGC GCCCACCCGG TCCGGGCTGC GTGACGCGGC AGCCTCCGGG TTCGCGCTGT TCATCCGCAC CGTGTCGCTT CGCGCAGTCC TTGTCGTCAC CACCGCGATC GCGGCCCGTC TCGGCGACCC GGAGATCGCC GCCCACCAAG TGGTGTTCCA ACTCTGGTCG CTGCTGGTTT TCGCGCTGGA CGCGATCGCC ATCGCAGGCC AGTCGATTGT CGGCCGCTAC CTGGGGGCCT CGGACGTGCC CGGCGCCCGC GAAGTCACCC GCCGAATGGT GGAGTGGGGG ATCATGATCG GCGCCGTCTT CACCGTGCTC GTCCTCGCGG TACGCCCCTG GGCGTGGATC CCGTTCACCG ACGACCCGCA CGTGCGCGAC CTCATCCTCG CCGCGCTGAT CGTCGTCGCG CTGCTGCAGC CGCTGAGCGG GGTCGTGATG GTCCTCGACG GGATCCTGAT GGGCGCTGGA GACCAGCGCT ACCTGGCCTG GGCGAGCCTG TGGACCATGC TGATCTTCCT GCCCTGCGCT GCCCTGGTCC CCCTCTTCGC CGTCCCCGGA TCCGTCACCG GCCTTGTCCT GCTGTGGTCG GCCTTCGGAG TGTGGATCGC GGCACGCGGA GTGTTCCTGG GCGTCCGGGC TTCCGGGACC GCGTGGCTCG TCACCGGGGC CGGATCCCCG CGGTAA
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Protein sequence | MARLSTTAPF RHPRDTEIFR LAIPTFFALV SEPLFLLTDS AVVGSLGTAA LGGLGVASQI LLTFANLCIF LAYGTTAAVS RRFGAGQIAL GLRHGIDGVW LAVLIAATAI TLGWPLSPLL IDALGASPTV APYALTYLRI SLLSLPGLLI IMAGTGVLRG LQNARIPLFV TVSANLANIV LSMLFVWGLG WGIAGSAWAT VVAQSGGAAI YLVVLVRAAQ RHGVSFAPTR SGLRDAAASG FALFIRTVSL RAVLVVTTAI AARLGDPEIA AHQVVFQLWS LLVFALDAIA IAGQSIVGRY LGASDVPGAR EVTRRMVEWG IMIGAVFTVL VLAVRPWAWI PFTDDPHVRD LILAALIVVA LLQPLSGVVM VLDGILMGAG DQRYLAWASL WTMLIFLPCA ALVPLFAVPG SVTGLVLLWS AFGVWIAARG VFLGVRASGT AWLVTGAGSP R
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