| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_3090 |
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| Symbol | |
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| ID | 3581358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 3610785 |
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| End bp | 3612347 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637686827 |
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| Product | putative beta-carotene desaturase/methylase |
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| Protein accession | YP_291146 |
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| Protein GI | 72163489 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3349] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCGC AGCCTCCCGG CCGCGACCCG CGCATCCAAC GCCACCTCCC GCCGCGCCCC
GTCGGATCCC CACCAGCACA ACCCGCCCGC GTCGCCGTCA TCGGCGGCGG CATCGCCGGC
CTGGCCGCAG CCACAGCGCT CGCGGAACGC GGTATAGCCG TCACCGTGCT GGAACGCGAC
CCGCAGCTAG GCGGCCGCCT CTCCGGGTGG GACACGGTGC TCACCGACGG CTCCACCGTC
ACCATGAGCC GCGGCTTCCA CGCGTTCTTC CGCCAGTACT ACAACCTGCG CGCCCTGCTG
CGCCGCGCCG ACCCCGGACT CTCCGGGTTC GTCCCCCTGC CCGACTATCC GCTCGTCCAC
GCCAACGGAG CCCTCGACGG GTTCGCGGGC CTGCCCACCA CGCCGCCATG GAACGCGTTC
ACCTTCGTCG CCCGCAGCCC CAGCTTCCAC TGGCGCGACC TCGCCCGCGT CAACCTGGTC
GCGGCCCTCG CCCTCCTCGA CGTCCGCGTC CCCGACGTCT ACCAGCAATT CGACCACGTC
GACGCGCTGG ACTTCCTCGA CCGGCTGCGG TTCCCCGACA CCGCCCGCCA CCTGGCGCTC
GAAGTGTTCT CCCGCAGCTT CTTCGCCGAC CCGCGCGCCC TGTCCGCGGC CGAACTGCTC
ACCATGTTCC ACATCTACTT CCTCGGCTCC GGCGAAGGAC TGCTCTTCGA CGTGCCGCGG
GCCCCCTTCC CCCGCGCCCT GTGGCAGCCG CTCGCCGACT ACCTGCGCTC CCACGGCGCC
GCCATCCTCA CCAGCACCCC GGTCACCCGG ATCGAACCGG GGCACACCCG CCGCTACTCT
GTGGCCACGC TGACCGGGAC CGCTGAATAC GACGCCGTGG TACTCGCCAC CGACCTGCCC
GGACTGCGCG CCCTCGTCGC CGCATCCCCC CGGCTCGGCA GCCCTGCCTG GCGCTCCCAA
GTCGCCGAAC GGCCCAGTGC CCCGCCCTTC CTCGTGTGCC GACTCTGGCT CGACCAGCCC
GTCCGCGCCG ACCGGCCCGC GTTCCTCGGC ACCAGCGGCT ACCCCACGCT CGACAACATC
AGCGTGCTGG AACGCTACGA AGACCAAGCG GCCGCGTGGG CGGCCCGCAC CGGCGGCTCC
GTCGTCGAAC TCCACGCCTA CGCGCTCCCC GACGATGCTG TGCTCTCCGT GGAGCGCGAC
CGGCTCGTCG CCCAACTCCA CCAGGTCTAC CCGGAGACCG CGACGGCGCG CATCGTCGAC
GAACGCTCCG AACTCCGCGC CGACTGCCCG CTCTTTCCCC CCGGCGACTT CACCCGACGG
CTCACCGTCA CCACCCCCGA TCCGTTCCTC GTCGTCGCCG GAGACCACGT CCGCGTCGAC
CTTCCCGTCG CGCTCATGGA ACGCGCCGCA ACCAGCGGCC TGCTCGCCGC CAACACCCTG
CTGAGCCTGT GGGGCTTGCC CGGCCATGTG GTGTGGAGCG TCCCCAACCA GGGGCGGATC
CCCCTCGCCC GGCACCTGCT GCCCCCGCTA CCGCGGACAC AGCCCTTGTC GGCCCTCGGG
TGA
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| Protein sequence | MIPQPPGRDP RIQRHLPPRP VGSPPAQPAR VAVIGGGIAG LAAATALAER GIAVTVLERD
PQLGGRLSGW DTVLTDGSTV TMSRGFHAFF RQYYNLRALL RRADPGLSGF VPLPDYPLVH
ANGALDGFAG LPTTPPWNAF TFVARSPSFH WRDLARVNLV AALALLDVRV PDVYQQFDHV
DALDFLDRLR FPDTARHLAL EVFSRSFFAD PRALSAAELL TMFHIYFLGS GEGLLFDVPR
APFPRALWQP LADYLRSHGA AILTSTPVTR IEPGHTRRYS VATLTGTAEY DAVVLATDLP
GLRALVAASP RLGSPAWRSQ VAERPSAPPF LVCRLWLDQP VRADRPAFLG TSGYPTLDNI
SVLERYEDQA AAWAARTGGS VVELHAYALP DDAVLSVERD RLVAQLHQVY PETATARIVD
ERSELRADCP LFPPGDFTRR LTVTTPDPFL VVAGDHVRVD LPVALMERAA TSGLLAANTL
LSLWGLPGHV VWSVPNQGRI PLARHLLPPL PRTQPLSALG
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