| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2923 |
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| Symbol | |
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| ID | 3581601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 3437970 |
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| End bp | 3439445 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637686652 |
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| Product | xylanase |
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| Protein accession | YP_290979 |
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| Protein GI | 72163322 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGAAA CCCGTCACCG TCCTTCGCGG CGAGCCAGAC GCTCGCTCAG CCTCCTCCTC
ACCTCGGCGC TGACTGCCGC CGGCCTGCTG GTCACGGCCG CCCCGGCACA GGCCGAGTCG
ACCCTGCGGG AACTGGCTGC CCAGAACGGC GGCCGCCACT TCGGTACGGC TATCGCCTAC
AGCCCGCTCA ACAGTGACGC CCAGTACCGC AACATCGCGG CTACCCAGTT CAGCGCCATC
ACCCACGAAA ACGAGATGAA GTGGGAGTCG CTGGAGCCGC AGCGGGGCCA GTACAACTGG
AGCCAGGCCG ACAACATCAT CAACTTCGCC AAGGCCAACA ACCAGATTGT GCGCGGCCAC
ACCCTGGTCT GGCACAGCCA GCTGCCGTCC TGGCTGAACA ACGGCGGCTT CTCCGGCAGC
CAGCTCCGGT CCATCATGGA GAACCACATC GAGGTGGTGG CCGGACGCTA CCGGGGTGAC
GTCTACGCCT GGGACGTGGT CAACGAAGCG TTCAACGAGG ACGGTACGCT CCGCGACTCG
ATCTGGTACC GCGGCATGGG TCGCGACTAC ATCGCCCACG CGTTCCGCAA GGCGCACGAG
GTCGACCCCG ACGCCAAGCT GTACATCAAC GACTACAACA TCGAAGGCAT CAACGCTAAG
AGCAACGGCC TCTACAACCT GGTGGTCGAC CTGCTCCGCG ACGGTGTGCC GATCCACGGT
ATCGGTATCC AGTCCCACCT GATCGTCGGC CAGGTGCCGT CCACGTTCCA GCAGAACATC
CAGCGGTTCG CTGACCTCGG CCTGGACGTG GCCATCACCG AGCTGGACAT CCGCATGCAG
ATGCCGGCCG ACCAGTACAA GCTCCAGCAG CAGGCCCGCG ACTACGAGGC CGTGGTCAAC
GCCTGCCTCG CGGTGACCCG CTGCATCGGT ATCACCGTCT GGGGTATCGA CGACGAGCGC
TCCTGGGTGC CCTACACCTT CCCGGGTGAA GGTGCTCCGC TGCTCTACGA CGGCCAGTAC
AACCGCAAGC CCGCCTGGTA CGCGGTCTAC GAGGCTCTCG GCGGCGACTC CTCCGGCGGC
GGTCCGGGTG AGCCGGGCGG TCCTGGCGGT CCGGGTGAGC CGGGCGGTCC TGGCGGTCCG
GGTGAACCGG GCGGCCCCGG TGACGGCACC TGCGCGGTGA ACTACACCGT GGTCAATGAC
TGGGGTCACG GTATGCAGGG GGCGATCACC GTCTCCAACA CCGGATCCTC GCCCATCAAC
AACTGGACCC TGCAGTTCAG CTTCTCGGGT GTGAACATCT CCAACGGCTG GAACGGCGAG
TGGAGCCAGA GCGGCTCGCA GATCACCGTC CGCGCTCCTG CCTGGAACTC CACGCTCCAG
CCGGGCCAGA GCGTGGAACT GGGCTTCGTT GCTGACAAGA CCGGCAACGT CTCCCCGCCC
TCCCAGTTCA CCCTCAACGG AGCCACCTGC TCCTGA
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| Protein sequence | MTETRHRPSR RARRSLSLLL TSALTAAGLL VTAAPAQAES TLRELAAQNG GRHFGTAIAY
SPLNSDAQYR NIAATQFSAI THENEMKWES LEPQRGQYNW SQADNIINFA KANNQIVRGH
TLVWHSQLPS WLNNGGFSGS QLRSIMENHI EVVAGRYRGD VYAWDVVNEA FNEDGTLRDS
IWYRGMGRDY IAHAFRKAHE VDPDAKLYIN DYNIEGINAK SNGLYNLVVD LLRDGVPIHG
IGIQSHLIVG QVPSTFQQNI QRFADLGLDV AITELDIRMQ MPADQYKLQQ QARDYEAVVN
ACLAVTRCIG ITVWGIDDER SWVPYTFPGE GAPLLYDGQY NRKPAWYAVY EALGGDSSGG
GPGEPGGPGG PGEPGGPGGP GEPGGPGDGT CAVNYTVVND WGHGMQGAIT VSNTGSSPIN
NWTLQFSFSG VNISNGWNGE WSQSGSQITV RAPAWNSTLQ PGQSVELGFV ADKTGNVSPP
SQFTLNGATC S
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