| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2883 |
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| Symbol | |
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| ID | 3581788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 3397370 |
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| End bp | 3399973 |
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| Gene Length | 2604 bp |
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| Protein Length | 867 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637686612 |
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| Product | L-aspartate oxidase |
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| Protein accession | YP_290939 |
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| Protein GI | 72163282 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0029] Aspartate oxidase
[COG0157] Nicotinate-nucleotide pyrophosphorylase |
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| TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase
[TIGR00551] L-aspartate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.401949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGCGA GCCCTGCCCC GATACCGCTG CGGCTGACCG CACCAGAGCC CGGCTGGACC
GCACACACCG ATGTGGTCAT CGTCGGATCA GGGATCGCAG GGCTCAGCAC CGCACTGCGC
TACATCGAGC GGACCCCCAC AGGCAGGGTC GTGCTCGTCA CCAAGGACCT CATCGCCAAC
GGCTCCACCC GGTGGGCACA AGGCGGGATC GCTGCCGCCG TCGACCCCGG CGACAACCCG
TGGGCCCACC TGGTGGACAC CATCGAAGCC GGGGCAGGGC TGTGCGACCC AGACGCGGTC
CGCATCCTCG TTGACGAAGG CCCCGCAGCC CTGCACTGGC TGATCGACCA GGGAACCGTC
TTCGACCGCA CCGACACCGG GGACCTCGCC CTCACCAGGG AAGGCGGCCA CCGCGCGCAC
CGCATCGCAC ACGCCGGTGG GGACGCTACC GGCGCGGAGA TCGAACGCGC CCTCGTCGAA
GCGGTCCGCG CCTGCGACCG CATTGAACTC ATCGAACACG CTTTCGTCCC CGACCTGCTC
GTCGGCGTCG ACACCCAGGG GCAGCGCCGG GTCGCCGGGG TCACCGTGCA CGTCATGGGC
GAGGGCGAAC GCGACGGCGT GGGCGCAATC CACGCCACAG CCGTTGTGCT CGCCACCGGA
GGCATGGGAC AGGTGTTCGC CGCCACCACC AACCCGGAAG TGTCCACCGG AGACGGTCTC
GCGTTGGCGC TGCGCGCCGG AGCACGCGTC CAAGACCTCG AATTCGTGCA ATTCCACCCC
ACCGTGCTGT GGCTGGGCGC CCACGCCCGC GGCCGCCAGC CCCTCGTCTC CGAAGCGGTC
CGCGGCGAAG GCGCGTTCCT CGTCGACGTG CACGGCCGCC GCTTCATGCG CGGCGTCCAC
GAGCTCGCGG ACCTCGCCCC CCGCGACGTC GTCGCCCGCG AAATCGCCCG GGCCATGGCC
GAAACCGGCG CCGACCATGT CTACCTGGAC GCCCGCCACT TCGGCGCCGA CAAGTGGGAA
CGCCGCTTCC CCACCATCCT CGCCTCGTGC CGCACCCACG GCATCGACCC GGTCACCGAC
CTCATCCCCG TCGCCCCGGC CGCGCACTAC GCGTCCGGCG GCATCCGCGT CGACCACGAC
GGGCGCACCG ACCTCGCCGG ACTGTACGCG GTCGGCGAGA CCGCCCGAAC CGGCGTGCAC
GGAGCCAACC GGCTCGCCTC CAACTCCCTG CTCGAAGGAG TGGTCTTCGC CGACCGGATC
GCCGCCGCCC TCGCCGACGA GCAGCCTCCC GCGTTGACCG GTCCGGTCCT GCCCGCCGGA
GGCGGCCCCA GCGGGCTCGC GGACCCGGAG ATCCTCCCCG AACTGCGGGA AGCCATGTCC
CGCTACGTCG GAGTGCGCCG CGACGCGGCA GGGCTTGCCA AAGCCACCGC GGTACTGGAA
GAGCTCACCG CCCGCGCTAC CGCCACCAAC CCCGCGCCGG GCGTGCCCGC CTGGCAGGCC
ACCAACCTGC TCACCGTCGC CTGGGCCCTG GTGCGGGCAG CGGAACGCCG CCAGGAAACC
CGCGGCTCCC ACTGGCGGGC CGACTACGAG CAGCCGTCGG CTCAGGCACG CTCCCGGACC
TTCATCCTCG ACCCGTCGGG AATCAGGGAG GACACGTCGA TGCGCCCCTA CACGCTGCCG
GAGGAACTCG TCGAGGAGCT CAACCGGATC ACCGTGCCCG AAGCTGCGCT GCGCGGAGCC
GCACCGGAGA AAACCCGGCC CGCCGTGGCA TGGCACGAAG AGCTCATCCG CACCGCGCTC
GCCGAGGACT GCTCCGGACA CCAGGTCGAC GTCACCACGG TCGCCACGAT TCCTCCCGCA
CAGATCCGCA CCGCCGACGT AGTCGCCCGC CGGGACGGGG TGGTCGCCGG GCTGCCCCTC
GCGGAACTCG TCTTCCGCCT CGTATGCGAA GGCGTTGTCG AAGTGATCCG GCACGCTCGC
GACGGCGACT CCGTCAAACG CGGCGACATT CTCATGACGG TCACTGCGCG CACCCGCGAC
CTGCTCACCG CGGAACGGAC CGCCCTGAAC TTCCTCACCC ACCTGTCGGG GATCGCTACC
GCCACCCGCG CCTGGGTGGA CGCGGTAGCC GGCACTAAAG CCGCGATTCG GGACAGCCGC
AAAACCCACC CGGGCCTGCG CGTCCTGGAA AAATACGCGG TTCGCTGCGG CGGCGGGGTC
AACCACCGCT TCGGGCTCGC GGATGCCGCT TTGATCAAGG ACAACCACAT CGCCGCGGCC
GGGGGAGTAG CCGAAGCAGT GCGAGCAGTC CGGGAGCGTT TCCCCGACAT CCCGCTGGAG
GTGGAAGTCG ACCGGATCGA CCAGATCGAA CCGGCGCTGG CCGCGGGCGC GGAAGAGATC
CTGCTCGACA ACTTCACCGT GCCCGAACTG CGGGAAGCAG TCGCTCTGGT CGCGGGCCGC
GCCCGCTTGG AGGCCAGCGG CGGGCTCACC CTCGATCGGG CAGCGGATGT GGCGGCCACC
GGAGTGGACT ATCTTGCGGT TGGCGCGCTC ACCCACTCCA GTCCCGCACT GGACATCGCG
CTCGATCTCC GTGAGAACTT CTGA
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| Protein sequence | MNASPAPIPL RLTAPEPGWT AHTDVVIVGS GIAGLSTALR YIERTPTGRV VLVTKDLIAN
GSTRWAQGGI AAAVDPGDNP WAHLVDTIEA GAGLCDPDAV RILVDEGPAA LHWLIDQGTV
FDRTDTGDLA LTREGGHRAH RIAHAGGDAT GAEIERALVE AVRACDRIEL IEHAFVPDLL
VGVDTQGQRR VAGVTVHVMG EGERDGVGAI HATAVVLATG GMGQVFAATT NPEVSTGDGL
ALALRAGARV QDLEFVQFHP TVLWLGAHAR GRQPLVSEAV RGEGAFLVDV HGRRFMRGVH
ELADLAPRDV VAREIARAMA ETGADHVYLD ARHFGADKWE RRFPTILASC RTHGIDPVTD
LIPVAPAAHY ASGGIRVDHD GRTDLAGLYA VGETARTGVH GANRLASNSL LEGVVFADRI
AAALADEQPP ALTGPVLPAG GGPSGLADPE ILPELREAMS RYVGVRRDAA GLAKATAVLE
ELTARATATN PAPGVPAWQA TNLLTVAWAL VRAAERRQET RGSHWRADYE QPSAQARSRT
FILDPSGIRE DTSMRPYTLP EELVEELNRI TVPEAALRGA APEKTRPAVA WHEELIRTAL
AEDCSGHQVD VTTVATIPPA QIRTADVVAR RDGVVAGLPL AELVFRLVCE GVVEVIRHAR
DGDSVKRGDI LMTVTARTRD LLTAERTALN FLTHLSGIAT ATRAWVDAVA GTKAAIRDSR
KTHPGLRVLE KYAVRCGGGV NHRFGLADAA LIKDNHIAAA GGVAEAVRAV RERFPDIPLE
VEVDRIDQIE PALAAGAEEI LLDNFTVPEL REAVALVAGR ARLEASGGLT LDRAADVAAT
GVDYLAVGAL THSSPALDIA LDLRENF
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