| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2860 |
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| Symbol | |
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| ID | 3581153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 3364944 |
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| End bp | 3366632 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637686588 |
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| Product | putative transmembrane transport protein |
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| Protein accession | YP_290916 |
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| Protein GI | 72163259 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00253612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACAC TCGTCGCGGT GGCCACCGTC ATGGTGGTCA CGCTACTGAT CGGACTGCAC
GGGGTGGCTG CCATGCGCAC CACCTCCGAC TTCCTCGTAG CGTCCCGCCG CGTCTCCCCG
CTGCTCAACT CCGCCGCAGT CTCCGGGGAA TACCTGTCCG CGGCCTCCTT CCTCGGCGTC
GCCGGGCTCG TCGTCCGCGA CGGGGTGGGT GCGCTGTGGT ATCCCGTCGG ATTCACCGCC
GGATACATCG CAATGCTCAT CCTCGTCGCC GCACCCATGC GCCGCTCCGG CGCGCTCACC
GTGCCCGACT TCGCCGAAGC ACGACTCGCC TCCCCCGGCC TGCGCCGCCT CAGCGCAGTC
GTCGTGCTCG TCATCGGCGC CCTCTACCTC GTGCCGCAGC TCCGCACCGC CGGACTCGTG
CTCAGCGTGG TCAGCGACCT GCCCTACTGG GTGGGGGTCG TCATCGCAGG CGTCGTCGTC
AGCGCCACCC TCGCCCTCGG CGGCATGCGC GCCGCCACCT ACGTGCAAGC CTTCCAGTTC
CTCGTCAAGC TCCTGCTGTT CATCGTCCCC GCGCTGTGGC TGCTCGTCAT CGTCGGCCCC
CACGTCCGCC ACGAAGCCGT CCACCCCGTG GAATTCACCC ACTTCCCCAA AGACACCGCG
GTCGAATTCC AGGTGGACGC CACCCTCACC TTCCCCGAAC CGGTCACCGT GCGCACCCCC
GACGGCACCG AAACCGTGCT CGGCCCCGGT GAAGTACGCG TCGACGCCAA CCAGACCCTC
GTCTTCCCCA AAGACACCCC CGTGCCCACC GTGAACGGCG GCGGCATCCC CGGCGGCGAA
CAATGGCACC GGCCCCTGCT CAACCTGAGC GACTACGGGC ACCCGCTGCT CGCCACCCTC
GCCGTGCTCA CCGCCACCGC CCTCGGCACC ATGGGCCTCC CGCACGTGCT CATGCGATTC
CACACCAGCC CTGACGGACG CTCCGCGCGC CGCACCGCCG CGTTCACCGT GGCACTGCTC
GGCATCTTCT ACCTGTTCCC CGGCATCTAC GGGGCGCTCG GCCGCGTACT CGTGCCCGAG
CTCTACCTGT CCGGAGTCAC CGACACCGTA GTCGTCGCCC TCCCGTCCCG CGTCTCCGAC
GACTGGGTAG GCACCCTCAT GACCACCCTC CTGTCGGTGG GCGCGTTCGC CGCGTTCCTC
GCCACCTCGG TGGGCTTGCT GCTCGTCATC TCCGGGGCGA TCTCCTACGA CCTGCTGCCC
GGCGGACTGC GCCGCCTGCG GATCACCGTG CTGCTCGCCG CAGCCGTCAT GGTGCTCCTC
GCGCTCCCCG CCGCACCTCT CGCCGCGGGC ATGCTCGTCA CCTGGGGGTT TACCGTGGCC
GCGTCCACGT TCTGCCCCCT GCTCGTCCTG GGGATCTGGT GGCCGCGGTT GACGAAAGCG
GGAGCCGTCA GCGGCGTCCT CGTCGGCCTG TTCAGTACCC TAGGTGCGAT CGCAGTGGCC
CTGTTCGGCC CCCCGCTCGC AGGCTGGCAG GCGATCCTCA TCACCCAGCC CGCGCCGTGG
ACCGTGCCGC TCGCCTTCGC CACCATGGTG GTGGTCTCCC TGCGCGGCCA AGCTCCCCCG
TGGTCGCGCA CCGCGATGCT CCGCCTCCAC CTGGACGAAC CGCCCCGCGA CACCCCGCTA
GGCCGCTAG
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| Protein sequence | MATLVAVATV MVVTLLIGLH GVAAMRTTSD FLVASRRVSP LLNSAAVSGE YLSAASFLGV
AGLVVRDGVG ALWYPVGFTA GYIAMLILVA APMRRSGALT VPDFAEARLA SPGLRRLSAV
VVLVIGALYL VPQLRTAGLV LSVVSDLPYW VGVVIAGVVV SATLALGGMR AATYVQAFQF
LVKLLLFIVP ALWLLVIVGP HVRHEAVHPV EFTHFPKDTA VEFQVDATLT FPEPVTVRTP
DGTETVLGPG EVRVDANQTL VFPKDTPVPT VNGGGIPGGE QWHRPLLNLS DYGHPLLATL
AVLTATALGT MGLPHVLMRF HTSPDGRSAR RTAAFTVALL GIFYLFPGIY GALGRVLVPE
LYLSGVTDTV VVALPSRVSD DWVGTLMTTL LSVGAFAAFL ATSVGLLLVI SGAISYDLLP
GGLRRLRITV LLAAAVMVLL ALPAAPLAAG MLVTWGFTVA ASTFCPLLVL GIWWPRLTKA
GAVSGVLVGL FSTLGAIAVA LFGPPLAGWQ AILITQPAPW TVPLAFATMV VVSLRGQAPP
WSRTAMLRLH LDEPPRDTPL GR
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