| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2798 |
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| Symbol | |
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| ID | 3580936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 3285627 |
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| End bp | 3287219 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637686523 |
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| Product | putative DNA-binding protein |
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| Protein accession | YP_290854 |
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| Protein GI | 72163197 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.322592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGCGT TCCACACACG GGAGTGGGGA AAGCGGATGA TCAGGCTCGA CCGGTTAGTC
AACGTCCTGG GACGCTTCGG AGTCCGGCTC TACTGCGACC CGCGGATGCG CCAGGCAGAA
CTGCGCAGCG TCGTCACCTA CGATCCCACC GACCCTCGGC CGGTCGGCGG TGACGTCTTC
CTCGCCGTGG GAGTGGCCAG CGTCGCCCAC GCCGTCGACC TCGCGGCCGC AGCCAACGCC
GTCGTCGTGC TGGTCCGCGC CGAAACACCC CCGGACAGCG ACGTGCTGTC CCGGGCCCGC
CACGAGGAGA TCGCGATCGC CGTCCTCGAC CCGGCCGTGT CGTGGAGCCA GCTCGCCGCG
GTCGCCTACG GGCTCGTCCT GGAAGGCCAA GAAACCGAGG CGGGCCGCGG CCCCACCGAC
CTGTTCGCGC TCGCAGACAC GATCGCCGGC GCCGTCGGCG GGCCGGTCAC GGTCGAAGAC
GTCCTGTCCC GCGTCCTCGC CTACTCCAGC CTCCAAGAAC ACACCGACCG TGCCCGGGCC
CGCACCATCC TGGGCCGGCG CGTCCCCGAA CCCGTCCGGC TCGCCCTCGC GGAACGCGGC
GTCTTCGCGC ACCTCGCCGA ATCCGACCAG CCGCTGTTCG TGCCACCCAT GCCCGAACAC
GGGCTCAACG GGCGTGTCGT GGTCGCCGTC CGCGCCGGAC GGGAACTCCT CGGCTCCATC
TGGGTGGACG CCGAAGCACC CCTCCCCCCG GCGCGCGCCG CCGCTTTGGA AAGCGGGGCC
CGCACCGTGG CCCTGCACTT GCTGCGCGCC CGCGCCAGCG CCGACCTGGA ACGCCAAGTC
GAATCCGACG GGGTGATCCA ACTCCTCGAA GGCCGCGGCG ATGCGCTGGT GACCGCCCAG
CTCGGCCTGC CCGTCGGCCC GTTCCGGGTC GTGGCCCTGC AAGCACACGT CGGCGACGAC
CAGCACGCCG CAGCCCTGCT GGTGTTCGAA CACGTCACCA CCGGATTCGG GTGGGCACGT
CCGGGACGCA GCGCCCTGTT CGGCACCACC GTCTACACGG TGCTCCCCGA TACCGGCGTG
GCCCGGGCCC GCGACTGGAT CGCCGGAGTG GTCGCCGCCC TGCCGTCCGA CGTGGAAGTG
CACGCGGGGA TCGGCGGACC CGCCGACATC GACCAGCTCA CCGAAAGCCG CCAGGAAGCC
GACGAAAGCC TGACCTTGCA CGCCGCCCAC CCGCGGGGGC GGATCGCAGT CAGCTACGAC
GACGACTGGG ACGAGATCCT GCTGGGCCGG CTCCGCCGGG TCGCCGCCAC CGGACGGATT
CCTGCGGGTC ACCCCGTGGC GCGCCTCGCC CGCCACGACC ACGAGCACGG CACCCGCCAC
GTGGAGACAC TCCGCGCCTG GTTCGACGCC CAAGGCGACC ACCGGGCCGC CGCCGACCTG
CTGGGCGTCC ACCCCAACAC GGTCCGCTAC CGGATGCGCC GCATGGCCGA GATCGCCCGT
GTCGACCTGG ACTGCCCCCG CACCAACCTC GCGCTCGCGA TCGCTCTCGC AGTAGAGGCC
GACGGTCCTT TTGTTCTCCG CGAACAGTCC TGA
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| Protein sequence | MRAFHTREWG KRMIRLDRLV NVLGRFGVRL YCDPRMRQAE LRSVVTYDPT DPRPVGGDVF
LAVGVASVAH AVDLAAAANA VVVLVRAETP PDSDVLSRAR HEEIAIAVLD PAVSWSQLAA
VAYGLVLEGQ ETEAGRGPTD LFALADTIAG AVGGPVTVED VLSRVLAYSS LQEHTDRARA
RTILGRRVPE PVRLALAERG VFAHLAESDQ PLFVPPMPEH GLNGRVVVAV RAGRELLGSI
WVDAEAPLPP ARAAALESGA RTVALHLLRA RASADLERQV ESDGVIQLLE GRGDALVTAQ
LGLPVGPFRV VALQAHVGDD QHAAALLVFE HVTTGFGWAR PGRSALFGTT VYTVLPDTGV
ARARDWIAGV VAALPSDVEV HAGIGGPADI DQLTESRQEA DESLTLHAAH PRGRIAVSYD
DDWDEILLGR LRRVAATGRI PAGHPVARLA RHDHEHGTRH VETLRAWFDA QGDHRAAADL
LGVHPNTVRY RMRRMAEIAR VDLDCPRTNL ALAIALAVEA DGPFVLREQS
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