| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2732 |
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| Symbol | hemC |
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| ID | 3581742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 3211905 |
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| End bp | 3212867 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637686455 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_290788 |
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| Protein GI | 72163131 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACCA CACCGGCCAG GCTCGGCACC CGCCGCAGCA CTATGGCCAC CAACCAGTCC
CGCAGGGTCG CCGAGATCCT CACCGCACGC ACCGGAGTAC CGGTCGAACT GGTCCTGATC
ACCAGCTTCG GCGACATCAC CCGCGCGCAC CTGACCCAAC TGGGCGGCAC CGGGGTTTTT
GTGAGCGCGC TCCGCGACGC CCTGCTCGCC GGCGAGGTGG AGTTCGCCGT CCACTCCCTC
AAAGACCTGC CGACCGCCCC CACTGAGGGG ATCGTGCTCG CCGCCGTCAC AGAACGGGAC
GACCCGCGGG ACGCCCTGTG CGCCCGCGAC GGCCTCAAGT TCGCCGACCT GCCCCCCGGC
GCCACGGTGG GCACCGGGTC GCCACGCCGG GTCGCGCAGC TCGCCGCGCT CCGCCCCGAC
CTGCGCTACG TGCCGATCCG CGGCAACGCA GAGACCCGGC TGGGCAAAGT CGCTTCTGGA
GAACTCGACG CGGTCGTACT CGCCTACGCC GGACTGCACC GGGTGGGCCG CCTCGACGAC
GTTACCGACG TCTTCGACGT GGACCAGGTC CTGCCTGCCC CCGGCCAGGG CGCGCTCGCC
GTCGAATGCC GCACCGCCGA CTTCACCGGA CCGTTGCGCT ATCTCACCGC GGTCGACCAT
CTCCCCACCC GGGCCGCGGT CACCGCGGAA CGTGTCATCC TGGCGGAACT AGAAGCCGGA
TGCGCCGCCC CGGTGGGCGC CTACGCCGAG TTCGTGGCTG AGGATCGCCT CCGCCTGCGC
GCCGCGGTCG TCGCCACGGA CGGCAGTCAG GCTGTGCGCG CCGAGCAGAC CGTCACCGTC
ACCGAATTCC CCGACGCGGT CCAGGCGGCC ACCGCACTCG GCCGCCAGCT CGCCCACGAC
ATGATCGAGC AGGGGGCCGA TCAGATCGTG GCCGACGCCG CGGCGGGAAG AGGAGAGAGC
TGA
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| Protein sequence | MSTTPARLGT RRSTMATNQS RRVAEILTAR TGVPVELVLI TSFGDITRAH LTQLGGTGVF
VSALRDALLA GEVEFAVHSL KDLPTAPTEG IVLAAVTERD DPRDALCARD GLKFADLPPG
ATVGTGSPRR VAQLAALRPD LRYVPIRGNA ETRLGKVASG ELDAVVLAYA GLHRVGRLDD
VTDVFDVDQV LPAPGQGALA VECRTADFTG PLRYLTAVDH LPTRAAVTAE RVILAELEAG
CAAPVGAYAE FVAEDRLRLR AAVVATDGSQ AVRAEQTVTV TEFPDAVQAA TALGRQLAHD
MIEQGADQIV ADAAAGRGES
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