| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2296 |
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| Symbol | |
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| ID | 3579135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2701736 |
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| End bp | 2704930 |
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| Gene Length | 3195 bp |
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| Protein Length | 1064 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637686005 |
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| Product | putative integral membrane efflux protein |
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| Protein accession | YP_290352 |
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| Protein GI | 72162695 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCACT TGGCCAAGCT CAGCCTTGGC AACCGGGCGC TGATCCTGCT GATCACCCTC
AGCGCACTGA TCTTCGGTGC GATCTCAGCA GGGTCCATGA AGCGCGAACT CATGCCGTCA
TTCGACGTGC CCATGGCCGT CGTCGGCGCC CAGTACCAAG GAGCCTCGCC GCAAGTCGTC
GAGAACGACG TCACCCAAGT CCTGGAACAG GCGGTCAAAG GCGTCCCCGG GGTGACGAGC
TACACCTCCA CCTCGAGTAC CGGAACCGCC CAGATCATTG CGGAGTTCGA CTACGGCGAC
TCCACCGACG ACGTCGTCCG CTCCCTGCAA AAAGCCGTCG ACCAGGTCGA ACCGTTCCTG
CCGGAGGACG TCGACCCCTA CGTCATGGCT TTCGGCATGG ACGACATCCC GGTGGTCATG
CTCGCCGTCG GAACCAGCGA CGACGACGCC CAGAAACTCG CCGAACCCAT CGAAGACCTG
CTCGTCCCCG AACTGGAGTC CATCAGCGGG GTGCGCGCCG TCCAAGTCAC CGGGATCCGC
GAGTCCACCG TGGTCGTCAC CCCCGACGAG GACAAGCTGG AGAAGGCCGG CTACACCGTC
GCCGACCTCA CTACCGCGCT GCAAGCCAGT GGACGCCTTC TACCCGGTGG GCAGATCACT
GAAGACGACC GCACGCTCAC CGTCACCACC GGCGGCCGGT TGGAGTCGCT CGAGGACGTG
GAGAACATCT GGCTGACGCC CAGCGGCGCA GCCGCAGCAG CGATCCCCGG CATGCCGGGA
GCCCGGGCCC CGGAACCCGT GCAGCTCTCC GAGGTCGCCG ACGTTGAACT GGTGCTCGAC
GAAGCCACCA GCATCACCCG GACCAACGGC GAACCGAGCC TCGGCATCCT GGTCACCAAG
ACCCCCGACG GCAACACCGT CGAAGTCTCC GAAAAGGTTC AGGAGCGCGC CACCGACATC
GCCGACCAGC TCGGTGACGA CATCAGCATC ACCGTGGTGT TCGACCAGGC GCCGTTCATC
AACGACTCCA TCGCCGCCAT GGCGGAGGAA GGCCTCCTGG GCCTCGGATT CGCGGTCCTC
ATCATCCTGG TCTTCCTGCT GTCGGTCCGC TCCACCATCG TCACCGCGGT CTCCATCCCG
GTGTCGCTCC TCATCGCGAT CCTGGGCATG TGGAGCTTCG ACTACACGCT CAACCTGCTC
ACCCTGGGCG GGTTGACCGT GGCCGTGGGG CGTGTGGTGG ACGACTCCAT CGTCGTCCTG
GAGAACATCA AACGCCACCT GAGCTACGGC GAAGACAAGC ACACCGCCGT GCTCACCGGG
GTGCGCGAGG TGGCGGTGGC CATCACCTCG GCCACGCTGA CCACCATCGC GGTGTTCCTG
CCCATCGGAT TCGTCAGCGG AGAAGTAGGC GAACTGTTCC GGCCGTTCGC GGTGACCGTC
AGCATCGCGC TCGCTGCGTC CCTGCTGGTC TCCCTCACGA TCATTCCGGT CCTCGCCTAC
TGGTTCATGA AGCCCAAAGT CGTTCCGCCC GAGGAGCTGG AACGCATCAA GGCAGAGGAG
TACCAGCGGG AACTGCGCTC CCCGCTGCAG CGCAGCTACC TGCCGGTGAT CCGCTGGGCC
ACCAAGTACC GCTGGACCAC GCTGCTGGCC GCCGGCGTGA TCTTCCTCGG CACGCTGGGG
ATGACCCCGT TCATCAAGAC GAACTTCCTG GAAGACCAGG GACAGAACAC GGTCAGCGTC
GTCCAGGAGC TTCCGGTGGG CACCTCCCTG GAGGCTGCCG ACGCCGAAGC AGCCAAAGTC
GAAGAAGCAT TGGAGAAAGT CGCCTGGATC GAGTCCTACC AGGCGACCTT CGGCGGCGGG
GGGATGTTCG GCGGCCTGTT CGGCGGCGCG GACAGCATCA CCTACACCAT CACCACCAAC
CCCGACGGGG ACCAGCTCGC CTACCGCGAG CAGCTGCGCG AGATCCTCGA GGAGATCGAC
ACCGAGGCGG AAGCCCGGAT CGACGCCACC GGCGGCTTCG GCTCCGTGCT GGAAGTGGTC
GTCAAAGCCG ACGACGCCGA GACACTCGCC GAAGCGACCG AACTCGTCGA GGAGACTGTC
CGCGACATCC CCGGGGCGGC TGACGTGCGC AGCAGCATCG CTGCCGTCCA GCCCGCCTTC
GAAATCCACG TCGACGGCGA GAAAGCCGCG AAGAAGGGAC TCACCGAAGG CCAGATCGGC
CAGGCGGTGA CCGCTGCCTT CCAAGGCACC AAGGTCGGCA CGGTGACCGT GGAGGACGTC
CAGCACGACA TGGTGCTGCG CGTGGACGAG GCCCCTGCCA CCGTCAAGGA ACTCGAAAAC
CTGCGGATCA CCACTCCCAC CGGCAGCGAG GTCAAACTCT CCTCGGTCGC CGAAGTGGAA
GAAGTGCTCC AGGCGCCCGA GCTGAGCCGC AGCGACGGCT TCCGCTCCGC CACGGTCACG
GCTACGCCCA CCGCCGACGA CCTCGGCCGG GTCACCAGCG AACTGTATGT GGCGCTGGCC
GACCTCGACC TGCCTGACGG AGCGACCGCG GAAATCGGCG GGGTCAGCGA AGACCAGAAC
GAGGCGTTCG CCCAGATGGG TGTCGCCATG CTGGTCGCGG TCGTGATCGT CTACCTGATC
ATGGTGGCGA CCTTCAAGAG CCTGCGCCAG CCGCTGGTGC TGCTCGTCTC CATCCCGTTC
GCGGCCACCG GGGCGCTGGG CCTCCTCTTG GTGACCGGAA CCCCGCTGAG CCTGCCCGCG
CTCATCGGCA TGCTCATGCT CATCGGCATC GTGGTCACCA ACGCGATCGT GCTCATCGAC
CTGGTCAACC AGTACCGTGC CAAGGGGATG GAGCTGCGGG AGGCCGTTGT CGAAGGCTCG
CGGCACCGGC TGCGGCCAGT GCTCATGACC GCGCTCGCCA CGATCGGCGC GCTCACCCCC
ATGGCTTTGG GGATCACCGG TGGCGGGGCG TTCATCTCCC AGCCGCTGGC GATCGTGGTC
ATCGGCGGAC TGATCAGCTC CACGCTGCTC ACCCTGATCC TGGTCCCCGT GCTCTACACC
ATGACCGAAG CGGCCAAGGA GCGCAGGCTC GCACGTCGGA AGGCCCGCCG GGAGGCGGAG
CTCGCCGCGG CCCGGGCCGC AGCGGGACAG TCGGAGCCCG CTCCGGCCGA AGCGAAGGAG
GACGCCACGA ACTGA
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| Protein sequence | MSHLAKLSLG NRALILLITL SALIFGAISA GSMKRELMPS FDVPMAVVGA QYQGASPQVV
ENDVTQVLEQ AVKGVPGVTS YTSTSSTGTA QIIAEFDYGD STDDVVRSLQ KAVDQVEPFL
PEDVDPYVMA FGMDDIPVVM LAVGTSDDDA QKLAEPIEDL LVPELESISG VRAVQVTGIR
ESTVVVTPDE DKLEKAGYTV ADLTTALQAS GRLLPGGQIT EDDRTLTVTT GGRLESLEDV
ENIWLTPSGA AAAAIPGMPG ARAPEPVQLS EVADVELVLD EATSITRTNG EPSLGILVTK
TPDGNTVEVS EKVQERATDI ADQLGDDISI TVVFDQAPFI NDSIAAMAEE GLLGLGFAVL
IILVFLLSVR STIVTAVSIP VSLLIAILGM WSFDYTLNLL TLGGLTVAVG RVVDDSIVVL
ENIKRHLSYG EDKHTAVLTG VREVAVAITS ATLTTIAVFL PIGFVSGEVG ELFRPFAVTV
SIALAASLLV SLTIIPVLAY WFMKPKVVPP EELERIKAEE YQRELRSPLQ RSYLPVIRWA
TKYRWTTLLA AGVIFLGTLG MTPFIKTNFL EDQGQNTVSV VQELPVGTSL EAADAEAAKV
EEALEKVAWI ESYQATFGGG GMFGGLFGGA DSITYTITTN PDGDQLAYRE QLREILEEID
TEAEARIDAT GGFGSVLEVV VKADDAETLA EATELVEETV RDIPGAADVR SSIAAVQPAF
EIHVDGEKAA KKGLTEGQIG QAVTAAFQGT KVGTVTVEDV QHDMVLRVDE APATVKELEN
LRITTPTGSE VKLSSVAEVE EVLQAPELSR SDGFRSATVT ATPTADDLGR VTSELYVALA
DLDLPDGATA EIGGVSEDQN EAFAQMGVAM LVAVVIVYLI MVATFKSLRQ PLVLLVSIPF
AATGALGLLL VTGTPLSLPA LIGMLMLIGI VVTNAIVLID LVNQYRAKGM ELREAVVEGS
RHRLRPVLMT ALATIGALTP MALGITGGGA FISQPLAIVV IGGLISSTLL TLILVPVLYT
MTEAAKERRL ARRKARREAE LAAARAAAGQ SEPAPAEAKE DATN
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