| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2264 |
|---|
| Symbol | |
|---|
| ID | 3581485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 2666750 |
|---|
| End bp | 2667556 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637685972 |
|---|
| Product | putative rRNA methylase |
|---|
| Protein accession | YP_290320 |
|---|
| Protein GI | 72162663 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACGTCA TCGAAGTAGC CGACCCGGCC GATGAGCGGC TAGCCGACTA TGTGCGGCTG
CGCGATACGA ACCTGCGCCG CAGCCTGGAG GCGAAGCACG GGCTGTTCCT CGCCGAAGGC
GAGAAAGTAG TGCGCCGAGC CCTGCGCGCC GGATACCAGC CCCGGTCGCT GCTGCTCACC
CGCCGTCGCC GCCGGGTGCT CGACGATGTG CTCGACACCT TCCAGGCACC GGTGTACGTG
GTCGACGACG CGGTCGCCGA GCAGCTGGTC GGTTTCCACA TCCACCGCGG GATTCTCGCC
TCTTTCCACC GCAAGCCGCT CCCTACGGTG CCCGAGGTCG TTGCGTCCGC GCGCCGCATC
GTGGTCCTTG AAGACATCGT CGACCACACC AATGTGGGGG CTATCTTCCG CAGCGCTGCC
GGATTGGGGG TGGACGCAGC GGTGCTCGCC CCACGCTGCG CGGATCCGCT GTACCGGCGG
GCCGTCAAAG TATCGATGGG CGCGGTCTTC ACCCTCCCCT ATGCGCGGCT CACCGACTGG
GCCAGCGGAC TGGAAGACCT GCGGCGGTCC GGGTTCACCC TGGTGGCGCT CACCCCGGCC
GCGGACGCGG TGCCGCTGCC GGAAGCGGTA CACCGCGACG GCAAGTACGC CTTGCTTTTC
GGCTCGGAAG GGGACGGGCT GTCCAGCCGG TGGCTCGACC AAGCCGACGT CCGGGCCCGT
ATCCCCATGG CTGTCCGCGA TGTGGACTCC CTCAACGTCA CCGCTGCCGC GGCGATCGCC
TGCTACGAGT TGATGCGTTC CGCGTGA
|
|---|
| Protein sequence | MNVIEVADPA DERLADYVRL RDTNLRRSLE AKHGLFLAEG EKVVRRALRA GYQPRSLLLT
RRRRRVLDDV LDTFQAPVYV VDDAVAEQLV GFHIHRGILA SFHRKPLPTV PEVVASARRI
VVLEDIVDHT NVGAIFRSAA GLGVDAAVLA PRCADPLYRR AVKVSMGAVF TLPYARLTDW
ASGLEDLRRS GFTLVALTPA ADAVPLPEAV HRDGKYALLF GSEGDGLSSR WLDQADVRAR
IPMAVRDVDS LNVTAAAAIA CYELMRSA
|
|---|
| |