Gene Tfu_2239 details

Gene Information

• Locus tag: Tfu_2239
• ID: 3580908
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 2634704
• End bp: 2636683
• Gene Length: 1980 bp
• Protein Length: 659 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637685947
• Product: hypothetical protein
• Protein accession: YP_290295
• Protein GI: 72162638
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG1960] Acyl-CoA dehydrogenases

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.823485
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCCAGC ACGGCGATAC AGCGAGAGTC GATGTCGAAG CGCTACGCGA CCTCTTGGAC 
GGCCGTTGGG CTGCGGTGCG GCGCCGCGCC CGCGACATAC TCCGCGGCCC GGAGTTCACC 
CCCCGCTACG GGCTGAGCGT GGCGGAGCAC CGCGCCCGAG TCACCGAGCA GTTGCACGCC 
TTGGCGCGTA CCGACCTGGC CCGCTACGGC TTCGACCCGC GGTACGGGGG CCGCGGAGAG 
GTGGGCGCCT CCGTGGCAGC GTTCGAAATG CTCGTCTGCG ATCTGTCGCT GATGGTGAAG 
ATGGGTGTGC AGTGGGGGCT GTTCGGCGGC GCGATCCAGG CGCTGGGCAC CGAATACCAC 
CACGCCACCT ACCTGCCGGG GGTGATGTCG CTGGAGATCC CCGGCTGTTT TGCCATGACG 
GAAACCGGTC ACGGCTCTGA CGTGCAGCGG CTCCGCACCA CCGCCACCTT CGACCCGAAC 
ACAGACGAAT TCGTCGTCCA TACCCCCGAC GAAGCGGCCC GCAAAGACTA CATCGGCAAC 
GCCGCCCGCG ACGGCCGGCT CGCCGTCGTG TTCGCGCAGT TGATCACTGG CGGGCAGCGG 
CACGGGGTGC ACGCCCTGCT GGTCCCCATC CGCGACGCCG ACGGCACCGT ACTGCCCGGG 
ATCCGCATCG AAGACTGCGG GCCTAAGGCA GGGCTCAACG GAGTGGACAA CGGCCGTATC 
TGGTTCACCC AAGTCCGGGT GCCGCGCACC GCGCTGCTCA ACCGGTACGG GGATGTGGCC 
GCCGACGGCA CCTATTCCAG TCCGATCGAG AACCCGAACC GGCGGTTCTT CACTATGCTC 
GGCACGCTCG TCCGCGGCCG GATCAGCGTG GCCGGGGGTG CTGGCATGGC GGCGAAGACC 
GCGCTGGCGA TCGCGATCCG CTACGGGCAG GTGCGCCGCC AGTTCCTCCG CCCCGGCAGC 
GACAGCGAGG TGGCGCTGCT GGACTACCTC GCCTACCAGC GCCGTCTGCT GCCGGCTCTG 
GCCCGCACCT ACGCGCTGCA CTTCGCCCAA GAGGAGATGG TGTCCCGGTT GCACGACGGT 
TTCACCGACG GGCCCCTGGA CGAGCGAGCG CAACGGGAAT TGGAGGCGCA CGCTGCCGGG 
TTGAAGGCGG TCGCCACCTG GCACGCCGTC GACACCATCC AGACCTGCCG GGAAGCGTGC 
GGCGGGGCAG GCTATCTGGC GGAGAACCGG CTTCCCCAAC TGCGCGCGGA CACGGACGTG 
TTCACCACCT TCGAAGGCGA CAACACGGTG CTGCTGCAGC TGGTGGGGAA AAGCCTGCTC 
ACCAACTACC GCCAGGAGTT CGGCAACCTT GACCCGCTGG GCATGGCCAA GTTCGCGGCC 
GGGCAGTTCC TCGGCACCGT GATCGAGCGC ACGGCTGCCC GCTCACTGCT GGACCGCCTG 
GTCCAGGCTG CCCCGGGGCG CGGAGACGAG GACGACCTGC GGAACCGGGA ATGGCAGCGT 
GCCCTGCTGG CAGACCGGGA GAACCACGTG CTGGAAGGGC TGGCGCGCCG GCTCCGCGCC 
GCCCCCGCCG ATGCCGACCC GTTCGACGTG GTCAACAACG TGCAAGACCA TGTGCTGCTC 
GCAGCCCGCG CCCACGTGGA CCGGCTGGTG TTCGAAGCGT TCGCTTCCGG TGTCGCCCGG 
ATTGAAGACG AAGGCACGCG GGCGGTCGTG GAGCGCCTGT GCGACCTGGC TGCGCTCTCC 
CTGGTGGAGC AGGAGCGCGC CTGGTTTCTG GAGCACGGGC GGCTCACCCC GGCCCGGGCC 
AAGGCGGTCA CCGCGACGGT GAACGCGCTG TGCCAGGAGC TGCGCCCTCA CGCCCGCGAC 
CTGGTGGACG CGTTCGGGTT GAACGACGAA TGGTTGGCCG CGCCGATCGC GCTGGGCGCG 
GAAACCGCCC GCCAAGATCA GCAGGCGCGG GCCCGGGTGC CGGTGGGCGC GGAGACGTGA 

 

Protein sequence

MPQHGDTARV DVEALRDLLD GRWAAVRRRA RDILRGPEFT PRYGLSVAEH RARVTEQLHA 
LARTDLARYG FDPRYGGRGE VGASVAAFEM LVCDLSLMVK MGVQWGLFGG AIQALGTEYH 
HATYLPGVMS LEIPGCFAMT ETGHGSDVQR LRTTATFDPN TDEFVVHTPD EAARKDYIGN 
AARDGRLAVV FAQLITGGQR HGVHALLVPI RDADGTVLPG IRIEDCGPKA GLNGVDNGRI 
WFTQVRVPRT ALLNRYGDVA ADGTYSSPIE NPNRRFFTML GTLVRGRISV AGGAGMAAKT 
ALAIAIRYGQ VRRQFLRPGS DSEVALLDYL AYQRRLLPAL ARTYALHFAQ EEMVSRLHDG 
FTDGPLDERA QRELEAHAAG LKAVATWHAV DTIQTCREAC GGAGYLAENR LPQLRADTDV 
FTTFEGDNTV LLQLVGKSLL TNYRQEFGNL DPLGMAKFAA GQFLGTVIER TAARSLLDRL 
VQAAPGRGDE DDLRNREWQR ALLADRENHV LEGLARRLRA APADADPFDV VNNVQDHVLL 
AARAHVDRLV FEAFASGVAR IEDEGTRAVV ERLCDLAALS LVEQERAWFL EHGRLTPARA 
KAVTATVNAL CQELRPHARD LVDAFGLNDE WLAAPIALGA ETARQDQQAR ARVPVGAET