| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2223 |
|---|
| Symbol | |
|---|
| ID | 3580929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 2619325 |
|---|
| End bp | 2620335 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637685930 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_290279 |
|---|
| Protein GI | 72162622 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01140] L-threonine-O-3-phosphate decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGATT TACGCCATCA CGGGGACGCC GAGGTCGGCC CCGGCCTCCT CGATTTCGCC
GTCAACGTGC GCGACCGCAC CCCGCCGCAG TGGCTGGTGG AACGCCTCGC CGCTTCCCTC
TCCGACCTGG CCGCCTACCC TGATCCGGAG TCGGCGCGTC ACGCTGTCGC CCGCCGCCAC
CGCCGCGACC CCGCCGACGT GCTGCTCACC GCGGGCGCAG CTGAAGCGTT CGTCCTGCTG
GCGCGTGCCC TCACCCCGCG CCGCGCCGTC GTCGTGCACC CCCAGTTCAC CGAGCCCGAA
GCAGCACTGC GCGCCGCCGG CCACCCGGTG GAACGCGTAG TGCTGGACGG CGACTTCACC
CTCGACCCCG ACCGGATCCC CGACGACGCA GACCTGGTCA TCGTCGGCAA CCCCACCAAC
CCCACCTCCG TGCTGCACCC GGCGGCAACC CTGGCCGCGC TCGCCCGGCC GGGCCGCATC
CTCGTCGTCG ACGAAGCCTT CGCCGACTGC ATTCCTGGGG AAGCAGAGTC CGTGGCTGGG
CGGACCGACC TGCCCGGCCT GGTCGTCATC CGCAGCCTCA CGAAGACCTG GGGACTTGCT
GGACTCCGCG TCGGCTACCT GCTGGCCGAC CCCGCACTGG TCCGCCGCTT TGCGGAACAC
CAGCCGCTCT GGGCAGTTTC CACTCCGGCA CTGGTCGCGG CCCGTGAATG CACGTCGCCC
CGAGCCCTCG CCGAAGCCGA CGCCTGGGCA GCCGATCTCG CGGTGCGCCG CACCCGCCTC
GTGGCAGACC TCACCGCGTT GGGCTTCACC GTCACCCCTC GACCGCGGGC ATCGTTCGTG
CTCGTCCACA CCCCCGGCGC TGACCTGCTC CGCCGCCGCC TGAGAGAACG GGGGATCGCG
GTGCGTCGCG GCGACACCTT CCCCGGTCTT GGAACGGACT ATTTACGCAT CGCGGTCCGA
CAAGCCGAGA CCAACGCCCA GCTCGTGACA GTTCTGGCAG AGTTGCTCTG A
|
|---|
| Protein sequence | MVDLRHHGDA EVGPGLLDFA VNVRDRTPPQ WLVERLAASL SDLAAYPDPE SARHAVARRH
RRDPADVLLT AGAAEAFVLL ARALTPRRAV VVHPQFTEPE AALRAAGHPV ERVVLDGDFT
LDPDRIPDDA DLVIVGNPTN PTSVLHPAAT LAALARPGRI LVVDEAFADC IPGEAESVAG
RTDLPGLVVI RSLTKTWGLA GLRVGYLLAD PALVRRFAEH QPLWAVSTPA LVAARECTSP
RALAEADAWA ADLAVRRTRL VADLTALGFT VTPRPRASFV LVHTPGADLL RRRLRERGIA
VRRGDTFPGL GTDYLRIAVR QAETNAQLVT VLAELL
|
|---|
| |