| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2218 |
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| Symbol | |
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| ID | 3580924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2609487 |
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| End bp | 2610833 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637685925 |
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| Product | GGDEF |
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| Protein accession | YP_290274 |
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| Protein GI | 72162617 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTCA CCCGGCATTC GACTACGGAG AGTACTTGTC GAGTGCTGTT CCGTCCCCGG
GAGTGGGCGC TGTTGACCCA GCCGCGTGCC GTGGTCGGCT TCGTGGTGAC ACTCGTCGCC
GTCGATGCGC TACTCGCGAT CGCCGGGGTA TGGACGACTG CTCTGCGCTC TGCGGAACTC
CTCACTGCCG CGGCGATCGT CATGTCCGGG GCGATCTGTG TCGAGGCGAT GCGCCGCCTA
GGGCTGCCTC AGGGGATGGT CCGCGACCTG CTCGGCACGT GGTGGATCCC GGTGGTACTG
CTGCTGCCGC CGGTGTACTC GCTCATCGTG CCGATCCCGC TGTACCTGCT GATGCAGTAC
CGCATTCAGC GCGCCGTAGT CTTCCGCCGC GTCTTCAGCG CCGCAGTGGT CGCCCTCGCC
GGGTTCTCCT CCTCGACCGT GTTCCACGCG CTCATCCCCG GACCGATCAT CCTGCTCGAC
GGGGTGACCG GGGCGGCAGG CAAGAGCGCC CTCATCAGCG GGGAGGGAAT CGGGGCCGCG
ATCCTGTGCG CGGTCCTGTT CACTGTGTGC AACACGGTGC TCATCACCGG GGCGATCCGC
ATGAGCGTCC CCGAAGAACC CCGCCGCACC ACAGTGTGGG ACTCTGAATC CCTCTTGCTG
GACGCGGTCG AAGTGTGCGT GGGACTGATC GTGTCCCTCC TGTGCGCGCT CTCCCTCTTC
CTGCTGCTGG TGGCGCTGCC CCCAGTGCTC CTGCTCCAGC GGAGCCTGCT CTTCCAGCAG
TTGCAGACGG CGGCACGCAC CGATCCCAAG ACCGGCCTGC TCAACGCGGT CGCGTGGGAG
CGGGTCGCTA AAACCGAGCT GACGCGGGCG TTGCGGACGG GCTGCCCGCT GGCCGTTCTC
ATCATTGACA TCGACCATTT CAAGAAGGTC AACGACACCC ATGGGCATCT GGTCGGCGAC
CAGGTGCTCC TCAACGTGGC GACCATGCTC AGCCAGCAGC TCCGCCCCTA CGACGTGATC
GGCCGGTTCG GCGGGGAGGA GTTCGTCGTG CTGCTGCCCG GAGCAGACAT GGCCGAGGCC
TGCCGGACCG CGGAGCGGCT GCGCACCCAG GTAGGGCGGA TGGCGCAGCC GATCAACGAC
ATCACCATCA CCGTCACCGT TTCGATCGGG GTGGCTCTCC TGCGAGTGCA CGGACGGGAT
CTGCTGGAGC TGATGGCCGC CGCGGACCTG GCGCTTTACC GGGCGAAAGA CTCTGGACGC
GACCGCGTCT GCCTTCCTGT CGCCACGACC GCGGGGGTCC CGGTCCGCTC CGTGACGGAC
CCGCCCACCG ATTCACGCGG CTCCTGA
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| Protein sequence | MTLTRHSTTE STCRVLFRPR EWALLTQPRA VVGFVVTLVA VDALLAIAGV WTTALRSAEL
LTAAAIVMSG AICVEAMRRL GLPQGMVRDL LGTWWIPVVL LLPPVYSLIV PIPLYLLMQY
RIQRAVVFRR VFSAAVVALA GFSSSTVFHA LIPGPIILLD GVTGAAGKSA LISGEGIGAA
ILCAVLFTVC NTVLITGAIR MSVPEEPRRT TVWDSESLLL DAVEVCVGLI VSLLCALSLF
LLLVALPPVL LLQRSLLFQQ LQTAARTDPK TGLLNAVAWE RVAKTELTRA LRTGCPLAVL
IIDIDHFKKV NDTHGHLVGD QVLLNVATML SQQLRPYDVI GRFGGEEFVV LLPGADMAEA
CRTAERLRTQ VGRMAQPIND ITITVTVSIG VALLRVHGRD LLELMAAADL ALYRAKDSGR
DRVCLPVATT AGVPVRSVTD PPTDSRGS
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