| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2176 |
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| Symbol | |
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| ID | 3580397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 2552833 |
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| End bp | 2555475 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637685881 |
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| Product | endoglucanase |
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| Protein accession | YP_290232 |
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| Protein GI | 72162575 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0658592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGTCA CTGAACCTCC TCCCCGCCGA CGCGGCCGTC ACAGCCGGGC GCGCCGCTTC
CTCACTTCCC TGGGAGCTAC CGCGGCCCTC ACCGCGGGCA TGCTGGGCGT CCCCTTGGCC
ACGGGAACCG CCCACGCCGA ACCGGCGTTC AACTACGCCG AAGCCCTCCA GAAGTCGATG
TTCTTCTACG AGGCCCAACG CTCCGGGAAA CTCCCGGAGA ACAACCGGGT CTCCTGGCGC
GGCGACTCCG GGCTCAACGA CGGCGCGGAC GTGGGACTCG ACCTCACCGG CGGCTGGTAC
GACGCCGGCG ACCACGTGAA ATTCGGCTTC CCCATGGCCT TCACCGCGAC CATGCTCGCC
TGGGGCGCCA TCGAAAGCCC GGAAGGCTAC ATCCGCTCCG GCCAGATGCC CTACCTCAAG
GACAACCTGC GCTGGGTCAA CGACTACTTC ATCAAAGCCC ACCCCTCGCC CAACGTGCTG
TACGTGCAGG TCGGCGACGG CGACGCCGAC CACAAGTGGT GGGGTCCGGC CGAAGTCATG
CCGATGGAGC GGCCCAGCTT CAAAGTGGAC CCCTCCTGCC CGGGCAGCGA CGTCGCAGCC
GAAACCGCCG CGGCCATGGC CGCGTCCTCC ATCGTGTTCG CCGACGACGA CCCTGCGTAC
GCGGCCACCC TCGTGCAGCA CGCCAAGCAG CTCTACACGT TCGCCGACAC CTACCGCGGC
GTGTACTCCG ACTGCGTGCC CGCCGGAGCG TTCTACAACT CCTGGTCGGG CTACCAGGAC
GAGCTCGTCT GGGGCGCCTA CTGGCTGTAC AAGGCCACCG GGGACGACTC CTACTTGGCG
AAGGCCGAGT ACGAGTACGA CTTCCTCTCC ACCGAGCAGC AGACCGACCT CCGCAGCTAC
CGGTGGACCA TCGCCTGGGA CGACAAGTCC TACGGCACCT ACGTGCTGCT CGCCAAGGAA
ACCGGCAAGC AAAAATACAT CGACGACGCC AACCGGTGGC TCGACTACTG GACGGTCGGC
GTCAACGGCC AGCGCGTGCC CTACTCCCCC GGCGGGATGG CTGTGCTCGA CACCTGGGGA
GCCCTGCGCT ACGCCGCTAA CACCGCGTTC GTCGCCCTCG TCTACGCCAA GGTGATCGAC
GACCCCGTCC GCAAGCAGCG GTACCACGAC TTCGCGGTGC GGCAGATCAA CTACGCGCTC
GGCGACAACC CGCGGAACTC CAGCTACGTG GTGGGCTTCG GCAACAACCC GCCGCGCAAC
CCCCACCACC GCACCGCGCA CGGGTCGTGG ACCGACAGCA TCGCCTCGCC CGCGGAGAAC
CGGCACGTCC TCTACGGCGC CCTCGTCGGC GGTCCCGGCT CCCCGAACGA CGCCTACACC
GACGACCGGC AGGACTACGT CGCCAACGAA GTCGCCACCG ACTACAACGC CGGATTCTCC
AGCGCGCTGG CCATGCTGGT CGAAGAGTAC GGCGGCACCC CGCTGGCGGA CTTCCCGCCC
ACCGAGGAGC CCGACGGACC GGAGATCTTC GTGGAAGCCC AGATCAACAC GCCGGGCACC
ACGTTCACCG AGATCAAAGC CATGATCCGC AACCAGTCGG GCTGGCCGGC CCGGATGCTG
GACAAGGGCA CCTTCCGGTA CTGGTTCACC CTCGATGAAG GCGTGGACCC CGCGGACATC
ACGGTGAGCT CCGCCTACAA CCAGTGCGCC ACCCCGGAGG ACGTCCACCA CGTCTCCGGC
GACCTGTACT ACGTGGAGAT CGACTGCACC GGGGAGAAGA TCTTCCCCGG CGGCCAGTCG
GAGCACCGCC GCGAAGTCCA GTTCCGCATC GCCGGCGGCC CCGGATGGGA CCCCTCCAAC
GACTGGTCCT TCCAAGGCAT CGGCAACGAA CTCGCCCCCG CCCCGTACAT CGTGCTCTAC
GACGACGGTG TACCGGTGTG GGGCACCGCC CCCGAGGAAG GGGAAGAGCC CGGCGGCGGA
GAAGGACCGG GAGGCGGCGA AGAACCCGGC GAGGACGTGA CCCCGCCGAG CGCGCCCGGC
TCCCCCGCGG TCCGGGACGT CACCTCCACC AGCGCCGTGC TCACCTGGTC CGCGTCCAGC
GACACCGGCG GCAGCGGCGT AGCCGGGTAC GACGTCTTCC TCCGCGCCGG CACAGGCCAG
GAGCAGAAGG TGGGATCCAC CACCCGGACC AGCTTCACCT TGACCGGTCT AGAACCCGAC
ACCACCTACA TCGCGGCTGT CGTGGCCCGG GACAACGCGG GCAACGTCTC CCAGCGGAGT
ACCGTCTCCT TCACCACGCT GGCCGAGAAC GGCGGCGGGC CTGACGCCTC CTGCACGGTG
GGCTACAGCA CCAACGACTG GGACTCCGGA TTCACCGCTT CGATCCGGAT CACCTACCAC
GGCACGGCCC CGCTCTCCAG CTGGGAGCTC TCCTTCACCT TCCCCGCTGG CCAGCAGGTC
ACCCACGGGT GGAACGCCAC GTGGCGCCAG GACGGGGCCG CCGTGACCGC CACCCCCATG
TCCTGGAACA GCTCCCTGGC GCCTGGAGCC ACCGTCGAGG TCGGCTTCAA CGGCTCCTGG
AGCGGCAGCA ACACACCTCC CACCGATTTC ACCCTCAACG GCGAGCCCTG CGCCCTCGCC
TAA
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| Protein sequence | MSVTEPPPRR RGRHSRARRF LTSLGATAAL TAGMLGVPLA TGTAHAEPAF NYAEALQKSM
FFYEAQRSGK LPENNRVSWR GDSGLNDGAD VGLDLTGGWY DAGDHVKFGF PMAFTATMLA
WGAIESPEGY IRSGQMPYLK DNLRWVNDYF IKAHPSPNVL YVQVGDGDAD HKWWGPAEVM
PMERPSFKVD PSCPGSDVAA ETAAAMAASS IVFADDDPAY AATLVQHAKQ LYTFADTYRG
VYSDCVPAGA FYNSWSGYQD ELVWGAYWLY KATGDDSYLA KAEYEYDFLS TEQQTDLRSY
RWTIAWDDKS YGTYVLLAKE TGKQKYIDDA NRWLDYWTVG VNGQRVPYSP GGMAVLDTWG
ALRYAANTAF VALVYAKVID DPVRKQRYHD FAVRQINYAL GDNPRNSSYV VGFGNNPPRN
PHHRTAHGSW TDSIASPAEN RHVLYGALVG GPGSPNDAYT DDRQDYVANE VATDYNAGFS
SALAMLVEEY GGTPLADFPP TEEPDGPEIF VEAQINTPGT TFTEIKAMIR NQSGWPARML
DKGTFRYWFT LDEGVDPADI TVSSAYNQCA TPEDVHHVSG DLYYVEIDCT GEKIFPGGQS
EHRREVQFRI AGGPGWDPSN DWSFQGIGNE LAPAPYIVLY DDGVPVWGTA PEEGEEPGGG
EGPGGGEEPG EDVTPPSAPG SPAVRDVTST SAVLTWSASS DTGGSGVAGY DVFLRAGTGQ
EQKVGSTTRT SFTLTGLEPD TTYIAAVVAR DNAGNVSQRS TVSFTTLAEN GGGPDASCTV
GYSTNDWDSG FTASIRITYH GTAPLSSWEL SFTFPAGQQV THGWNATWRQ DGAAVTATPM
SWNSSLAPGA TVEVGFNGSW SGSNTPPTDF TLNGEPCALA
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