Gene Tfu_2087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_2087 
Symbol 
ID3579347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp2448881 
End bp2449555 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID637685783 
Producthydrolase 
Protein accessionYP_290143 
Protein GI72162486 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCATCG CAGACTTCCC CGCTGGACCG CTCGCGGCGA ACTGTTACGT CGTCGCCCCG 
GAAGCGGGAG CGGAGTGCGT CATCGTCGAC CCGGGGCAGC AGGCCACAGA AGGAGTGGCC 
CGCCTGCTGG ACGAGTACCG TCTGACCCCG GTGGCCGTCT TGCTCACCCA CGGTCACTTC 
GACCACGTAT GGTCGGCCGA AGAGGTGTGC CAGACTCACG ATATCGCGGC GTATGCGCAC 
GCGGCGGACC GCCCGCTGCT GAGCGATCCG GCACGAGGCG TGGATCCCGG GCTGGCAGCG 
CAGTTGGCGG CGCTGTTCGG CAACGAGCAG TTGCGCGAAC CGAAGCAGGT GGTCGAGGTC 
ACCGACGGTC AGGTGTTGCA GCTAGCGGGG CTGGAGATCA CCGTGGCGCA CGCCCCCGGC 
CACACCCCGG GATCGGTGGT CTACGCGCTT CCGCCGACCG AGGACACCCC GGAGGTGCTG 
TTCACCGGCG ACCTGCTGTT TGCGGGCTCG ATCGGCCGCA CCGACTTTCC CGGCGGCGAC 
CACGCGGCGA TCATGCGGAG CTTGTCCCGT GTCTGTTTGA GCCGGGGGGA CGACACTGTC 
GTGCTCCCGG GCCACGGTCC GCGCACCACG ATCGGCCGGG AACGGGCCAC TAACCCCTTC 
CTGCGCGGCC TGTAG
 
Protein sequence
MLIADFPAGP LAANCYVVAP EAGAECVIVD PGQQATEGVA RLLDEYRLTP VAVLLTHGHF 
DHVWSAEEVC QTHDIAAYAH AADRPLLSDP ARGVDPGLAA QLAALFGNEQ LREPKQVVEV 
TDGQVLQLAG LEITVAHAPG HTPGSVVYAL PPTEDTPEVL FTGDLLFAGS IGRTDFPGGD 
HAAIMRSLSR VCLSRGDDTV VLPGHGPRTT IGRERATNPF LRGL