| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2070 |
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| Symbol | alaS |
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| ID | 3581616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2423584 |
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| End bp | 2426253 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637685766 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_290126 |
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| Protein GI | 72162469 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.450401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCGG CAGAGATCGC TCGCCGCTTC CTCGCATTCT TCGAGAAAAA CGGACACACC
GTGGTGCCCT CGGCAAGTCT TATCGCTGAG GACCCCACAC TGCTGCTGGT CAACGCGGGC
ATGGTGCCGT TCAAGCCGTA CTTCCTCGGC CAGCGGACTC CGCCCTACCC GCGCGCCACC
AGCGTGCAAA AGTGTGTACG CACCATTGAC ATCGACGAAG TCGGCAAGAC CACCCGTCAC
GCCTCCTTCT TCCAGATGCT GGGCAACTTC TCCTTCGGCG ACTACTTCAA GGAGAAGGCC
ATCCCGCTCG CCTGGGAGCT GCTCACCACC TCGGTGGCCG ACGGTGGCTT CGGCTTCGAC
CCGGAACGCC TGTGGGTCAC CGTCTACCTG GACGACGACG AAGCCGCGAC CATCTGGCGG
GAGAAGGTAG GACTGCCCGA GGAGCGCATC CAGCGGCGCG GCAAAGCCGA CAACTTCTGG
TCGATGGGTG TGCCCGGACC GTGCGGACCC TGCTCGGAGA TCTACTTCGA CCGCGGCCCC
GAATACGGCG CTGAAGGCGG CCCCGTAGCC GACGAGGACC GCTACCTCGA AGTGTGGAAC
CTCGTGTTCA TGCAGTTCGA GCGGGGCGAG GGCAGCGGCA AGGAGGACTA CCCGATCCTC
GGGGAGCTGC CCAGCAAGAA CATCGACACC GGCATGGGCC TGGAGCGCAT GGCCGCCATC
CTCCAGGGTG TCGACAACAT CTACGAGACC GACACCCTCG GCCGGATCCT GCGCCGCGCT
GCGGAGCTCA CCGGCACCAC CTACGGGGAG AACGAGCGCG CCGACGTGAG CCTGCGGGTC
ATCGCCGACC ACGTGCGCAC CGCCACCATG CTGGTCGCCG ACGGGGTGCG GCCTGGAAAC
GAGAAGCGCG GCTACGTGCT GCGCCGTATC CTGCGTCGGT CGATCCGCAA CCTGCGCCTG
CTCTCCGGGG ACGAGTCGTT CCACATGCAC GACCTCACCG CGGTCGCGAT CGACGCGATG
GGCGACCAGT ACCCCGAGCT GCGTGCCGAC GCGGACAAGA TCCACAGCAT CATCGACGCG
GAAGAGAAGA ACTTCGCGGA CACGCTGCGG GCCGGCACCA CACTGTTCAA CCGGGCGGTC
CGGCGCACGA AGGAGACCGG CGGCACCGTG TTCTCCGGCG CCGACGCGTT CCAGCTGCAC
GACACCTACG GTTTCCCCAT TGACCTGACG CTGGAGATGG CCGCCGAGCA CGGCCTGAAG
GTCGATGAAG AAACCTTCCA CCAGCTCATG CAGCGCCAGC GGGAGACCGC CAAGCGCGAC
GCGCAGGCCA AGAAGCTCGG CAACGCCGAT ATCAGCGTCT ACGGCAACCT GTTGGAGACC
GGCGGCCCCA CCGAGTTCCT CGGCTACACC GACTCGGAAA GCGAAGCCCG GGTGCTCGGC
ATCATCGTCA ACGGCGAGTC CACCGGGGCG GCCCGCAAGG GCGACCAGGT GGAACTGGTG
CTCGACCGCA CCCCCTTCTA CGCGGAAAGC GGTGGCCAGC TCGCTGACAA GGGCACGATC
ACCGTGGACG GCCGCGGCGT CGTCGACGTC GAGGACGTGC AGAAGCCCAT CCAAGGCCTG
TTTGTGCACC GCGGCACGGT CCGCGAGGGC GAAGTCGTCG TCGACGACAC CGTGCACGCC
GCGATTGACA CGGGTCGGCG CGCCTCCGTG TCCCGCTCGC ACTCGGCGAC CCACCTCATC
CACTCTGCGC TGCGGAACAC CCTCGGCCCG TCCGCAGGCC AGGCAGGGTC GGAGAACCAG
CCGGGACGGC TGCGCTTCGA CTTCACCTCG GACAAACCGC TCGACGCTAC GGAAATCGCC
CAGGTCGAGG AGGAAGTCAA CGAGGTACTC GCCCGCAACA TCGAGGTCCA GTACCTGGAG
ACCACCCTTG ACGAGGCGCT CCGGATGGGC GCGCTGGCCA TGTTCGGGGA GAAGTACGGC
AACCGGGTGC GCGTGGTCGA CATGACCGAG TACTCCCGCG AGCTGTGCGG CGGCACCCAC
GTGGCGGCGA CCGGGCAGCT CGGCCTGGTC AAGGTGCTCG GGGAATCCTC GGTCGGCTCC
GGGGTGCGCC GCGTGGAAGC GCTGGTCGGC TTGGACGCGC TGCGCCGCGT CTCCACCGAG
TCGGCGCTGG TGGGACAGCT TTCCGAGCAG CTCAAGGCGC CGCGCGAGGA ACTGCCGCAG
CGCATCGACA GCCTGGTCTC TCGGCTGCGC GCCGCGGAGA AGGAGATCGA GCGGCTGCGC
GCCGCCCAAG TCCTCCAAGC CGCCGGAAAG CTGGCGGAAA GCGCCCGCGA CCACGGCAAC
AGCCGCGTGG TGACCCACCG GGTTGAAGAC GGCACCACCG CCGACGACAT GCGCAAGCTC
GCGTTGGACG TGCGCGGCCG GCTCGGTGAG GACCGGCCCG CGGTGGTGGC GATCGCCGGC
GTGCCCAGCG ACCGCCCCGT CGTGGTGGTG GCGATCAACA AGGAAGCCCA ACAGGCGGGC
TTGAAGGCGG GCGAGCTGGT CGGCGTGGCG GCCCGTGCAC TCGGCGGTGG CGGCGGCGGC
CGTCCGGACA TCGCCCAGGG TGGCGGCAGC GACGTGACCG CCATCGACAC GGCGCTGCGC
CTCGTGGAAC AGAGAGTGGC GGGGTCGTGA
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| Protein sequence | MKSAEIARRF LAFFEKNGHT VVPSASLIAE DPTLLLVNAG MVPFKPYFLG QRTPPYPRAT
SVQKCVRTID IDEVGKTTRH ASFFQMLGNF SFGDYFKEKA IPLAWELLTT SVADGGFGFD
PERLWVTVYL DDDEAATIWR EKVGLPEERI QRRGKADNFW SMGVPGPCGP CSEIYFDRGP
EYGAEGGPVA DEDRYLEVWN LVFMQFERGE GSGKEDYPIL GELPSKNIDT GMGLERMAAI
LQGVDNIYET DTLGRILRRA AELTGTTYGE NERADVSLRV IADHVRTATM LVADGVRPGN
EKRGYVLRRI LRRSIRNLRL LSGDESFHMH DLTAVAIDAM GDQYPELRAD ADKIHSIIDA
EEKNFADTLR AGTTLFNRAV RRTKETGGTV FSGADAFQLH DTYGFPIDLT LEMAAEHGLK
VDEETFHQLM QRQRETAKRD AQAKKLGNAD ISVYGNLLET GGPTEFLGYT DSESEARVLG
IIVNGESTGA ARKGDQVELV LDRTPFYAES GGQLADKGTI TVDGRGVVDV EDVQKPIQGL
FVHRGTVREG EVVVDDTVHA AIDTGRRASV SRSHSATHLI HSALRNTLGP SAGQAGSENQ
PGRLRFDFTS DKPLDATEIA QVEEEVNEVL ARNIEVQYLE TTLDEALRMG ALAMFGEKYG
NRVRVVDMTE YSRELCGGTH VAATGQLGLV KVLGESSVGS GVRRVEALVG LDALRRVSTE
SALVGQLSEQ LKAPREELPQ RIDSLVSRLR AAEKEIERLR AAQVLQAAGK LAESARDHGN
SRVVTHRVED GTTADDMRKL ALDVRGRLGE DRPAVVAIAG VPSDRPVVVV AINKEAQQAG
LKAGELVGVA ARALGGGGGG RPDIAQGGGS DVTAIDTALR LVEQRVAGS
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