Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1972 |
Symbol | |
ID | 3581303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 2304067 |
End bp | 2305188 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637685665 |
Product | hypothetical protein |
Protein accession | YP_290028 |
Protein GI | 72162371 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism [T] Signal transduction mechanisms |
COG ID | [COG2508] Regulator of polyketide synthase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGCCC TGGGCACGGC CGCAGTAGCC CAGATGGAAC AGCGGCTGTC ATGGTTCCGC TCCATGTCCG CGGAAGACCG CTCCTGGGTG GGCCTCGTCG CCCAGTCAGG GGTCGCGGCT TTCGTCGACT GGTTCAAAAA CCCGCACCGG GGCCGCCCCG CGATCGCCGT GGAAGTGTTC GGCACGGCGC CGCGGGAACT CATCCGCTCA GTGTCGCTGC AGCAGACCGT GGAAATGGTG CGGGTCGTCA TCGACGTGGT GGAGAGCCGG GTCTCCGAAC TCGCTGCCCC CGGCGGCGAA CAGCAGTTGC GCGAAGCCAT GCTCCGCTAC AGCCGGGAAG TGGCGTTCAG CACGGCCCGC ATCTACGCCC GAGCCGCAGA AGCCAGAGGA GCCTGGGATG CCCGGCTGGA AGCGCTGATC GTCGACGCCC TGCTGCACGG CAACCGCGAA GAAGGCCTCC AGACGTGGGG TGCCTCCCTC GGCTGGTCGC GCATCCCCGT CATCGCGATC GCGGGCCTCC TCGGCGACCA AGACGCCGAA GAAACCCTGG AAGACCTGCG CTCCCATGCC CGTCGGGCAG GACATGACGT GCTCGCAGGC GTCCAAGGCG ACCGTGTCGT CGTCGTTGTA GGCGTCAACG AGAAGAACGC TTCCGACCCC ATGGGCGCGG CCACACCACT AGCGGGACTG TTCGGCCCGG GACCGGTCGT GGTGGGACCC CCCGTCTACG ACTTGAGCGC CGCCAACCAG TCGGCCCGCG CCGCCGTGGA CGGGCTGCGC GCCGCCCCCG GCTGGCCGGA CGCGCCCCGG CCGGTCGCTG CCGAGGACCT GCTGCCCGAA CGGGCACTGA ACGGGGACCC GGCCGCGCGG CGCACCCTCA TCGAAGAGGT GTACCAGCCG CTGCGGGACG CGGGCACCCC CCTGCTGGAC ACCCTGTCGG TCTACCTGGA GCACGCCTCG TCCCTGGAGT CCACCGCGCG GATGCTGTTC GTCCACCCCA ACACGGTGCG CTACCGGCTC AGCAGAGTGG CGGAGCTCAC CGGCTACGTC CCCACCGACG GCCGCGGATC GTTCGTGCTG CGGGTAGCGC TGACCCTCGG CCGGCTCGCC GACACCCCGT AA
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Protein sequence | MGALGTAAVA QMEQRLSWFR SMSAEDRSWV GLVAQSGVAA FVDWFKNPHR GRPAIAVEVF GTAPRELIRS VSLQQTVEMV RVVIDVVESR VSELAAPGGE QQLREAMLRY SREVAFSTAR IYARAAEARG AWDARLEALI VDALLHGNRE EGLQTWGASL GWSRIPVIAI AGLLGDQDAE ETLEDLRSHA RRAGHDVLAG VQGDRVVVVV GVNEKNASDP MGAATPLAGL FGPGPVVVGP PVYDLSAANQ SARAAVDGLR AAPGWPDAPR PVAAEDLLPE RALNGDPAAR RTLIEEVYQP LRDAGTPLLD TLSVYLEHAS SLESTARMLF VHPNTVRYRL SRVAELTGYV PTDGRGSFVL RVALTLGRLA DTP
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