| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1880 |
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| Symbol | |
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| ID | 3579463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2202377 |
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| End bp | 2203975 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637685572 |
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| Product | ABC transporter ATPase |
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| Protein accession | YP_289936 |
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| Protein GI | 72162279 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.548476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCATCG CCTCTGACCT TGAGCTCCGG GTGGGCGCAC GCCTGCTGCT GGCGCCTGCG
TCTTTCCAGG TGGGGCCGGG TGATCGCATT GGTCTCGTCG GCCGCAACGG CGCGGGCAAG
ACCACCTTGA CCAAAGTGCT GGCGGGGGAG GCGATTCCGG CCGCGGGAAA GGTCACCCGA
ACCGGCACGG TCGGCTATTT GCCGCAGGAT CCGCGGACCG GTGACCTGGA CGTAGTGGCG
CGCGACCGTA TTCTCTCGGC CCGCGGAATC GACGAGGTGC TGCGTCAGTT GCGCGTCGCG
GAACAGAAAA TGGCCAGCGA GGTCCCCAAG ATTCGGGACC AGGGGGTGCG CGCCTACGCG
CGGCTCGAGG AGCGCCTGCA CGTGCTCGGC GGGTACGCGG CGGAAGCCGA AGCGGCGTCG
ATCGCTTCCA GCCTGGGCTT GGAACAGCGG ATCCTCACCC AGCCGCTGCG CACCCTCTCC
GGCGGGCAGC GGCGCCGCGT GGAACTGGCC CGCATCCTGT TCAGCGGGGC GGATACGCTG
CTGCTGGACG AGCCCACCAA CCACCTCGAC GGCGACTCCA TCGCCTGGCT GCGCGACTTC
CTCAAGTCCT ACCAGGGCGG GCTCGTGGTC ATCAGCCACG ACGTGGACCT GATCGAGCAC
GTCGTCAACA AGGTGTTCTA CCTGGATGCC AGCCGCAGCA CTCTCGACAT CTACAACATG
GGCTGGCGGG CCTACCTGGA ACAGCGGGAG GCCGACGAGC GGCGCCGCAA GCGGGAGCGC
GCCAACGCGG AGAAGCAGGC GGCGGCGCTG CAGCGGCAGG CCGAACGGTT CCGGGCGAAA
GCCAGCCGGG CCCGCGCCGC CCAGCAGATG CTCCACCGGG CGGAGCGGCT GCTCGAGTCG
GTCGAGGAGG AACGGGGGCC GGACCGGGTC GCTAAGCTCC GCCTTCCGGA TCCCGCGCCA
TGCGGGCGCA CCCCGCTCGC CGCGGAAGGA CTGTCGAAGT CGTACGGTTC ACTGGAAGTG
TTCTCCGGGG TGGACCTGGC AGTGGACCGC GGCAGCCGAG TGGTGGTCCT CGGGCTGAAC
GGTGCGGGCA AGACGACGCT GCTGCGCCTG CTGGCGGGGA TCGAGCAGCC CGACACCGGC
CGGGTGATCC GCGGGCACGG TCTACGGCTC GGCTACTACG CCCAGGAGCA TGAAGAGCTC
GACCTCGACC GCACGGTGCT GGAGAACATG GTGAGCGCGG CCCCGGACCT GCCCGAGGTG
GAGGTCCGCC GTGTGCTGGG GTCCTTCCTG TTCAGCGGGG ACGACGTGTA CAAGCCCGTG
CGGGTGCTCT CCGGCGGGGA GAAGACGCGG CTGGCCCTGG CCACGCTCGT GGTGTCCAGC
GCCAACGTGC TGCTGCTGGA CGAGCCGACC AACAACTTGG ATCCGGCGAG CCGGGACGAG
GTCCTCAACG CGCTCCGCAC CTACCGGGGA GCGATCGTCT TGGTGACTCA CGACGAGGGC
GCGGTGGAGG CCCTCCAACC GGAACGGGTG GTCTTCCTGC CCGACGGGGT GGAGGACTTC
TGGGACGCGG AGTTCACCGA TCTCGTGGCG CTGGCTTGA
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| Protein sequence | MIIASDLELR VGARLLLAPA SFQVGPGDRI GLVGRNGAGK TTLTKVLAGE AIPAAGKVTR
TGTVGYLPQD PRTGDLDVVA RDRILSARGI DEVLRQLRVA EQKMASEVPK IRDQGVRAYA
RLEERLHVLG GYAAEAEAAS IASSLGLEQR ILTQPLRTLS GGQRRRVELA RILFSGADTL
LLDEPTNHLD GDSIAWLRDF LKSYQGGLVV ISHDVDLIEH VVNKVFYLDA SRSTLDIYNM
GWRAYLEQRE ADERRRKRER ANAEKQAAAL QRQAERFRAK ASRARAAQQM LHRAERLLES
VEEERGPDRV AKLRLPDPAP CGRTPLAAEG LSKSYGSLEV FSGVDLAVDR GSRVVVLGLN
GAGKTTLLRL LAGIEQPDTG RVIRGHGLRL GYYAQEHEEL DLDRTVLENM VSAAPDLPEV
EVRRVLGSFL FSGDDVYKPV RVLSGGEKTR LALATLVVSS ANVLLLDEPT NNLDPASRDE
VLNALRTYRG AIVLVTHDEG AVEALQPERV VFLPDGVEDF WDAEFTDLVA LA
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