Gene Tfu_1864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1864 
Symbol 
ID3579543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2171635 
End bp2172720 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content65% 
IMG OID637685556 
Productiron(III) dicitrate transport permease 
Protein accessionYP_289920 
Protein GI72162263 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0163858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGTTGG GAAAGCCCTC CACCACCCTC TACCGTTCAC TTAGGCAAGG CTTGCCTAAC 
TTAATCGTGG TTGTAGGACA CTGGCCACCG ACACGAAGAA AGCGATCAAG AGTGCAGCAG
AAAGCCCTCC GAAGCGGACT TGTCCTCGGC GCAGGCGCCC TCGCCCTCAG CCTCACCCTG
ACCGCCTGCG GTGATGCGCA GGAGGCAGCG GACACCCCCG CACAGGGCGA CACGGTCACC
GTCGAAACGG ACTACGGGAC CGTCGAGATC CCCGCTGACC CGCAACGCAT CGTCGCCCTG
GAATTCGGCA CCGAGGTCGT GCTGGAAGCC GGGATCGAGC CTGTCGGTGT GATCGAACCA
GTAGCCACCC TCTACACCGC TGAAGAATTC GAGCAGCTCT CCACCTACCC GGTCGTGCAG
TCGGCGAGCC TGGAGATCAA CATGGAGGCC ATCGCGGAGG CCCAGCCCGA CCTGATCATC
GGCGGGGTCC GCGTGGAGAG CCACGACGAG TACGTCGGCA TCCGCGAAGA CCTCGAGAAG
ATCGCCCCCA CCGTCTTCTT CGACTTCGAC GGTGCGGGCT CCGGGCTGCG CAACATGACG
CTCGAACTGT CGCGGGTCGT CGGCGACGGG GAGCGGGCCG AAGCCGAACA GCAGCGCTTC
GAAGAGCGGG TCGAGGAGAT CTCCACCGCC TACGCCGACC AGTTGGCCGA CACCACCTTC
GCGCTGGTCT TCGGCGTGGA CGGCGAATTC GCCGTGGTCA ACACCAACGC CTGGGGCGGG
GAGATCCTCC ACACGCTCGG TGCGAAGCAG AGCAAGGCGC AGCAGCCGGC GGGGGAGAAC
TTCGCTGCCT TCTACTCCTA CGAGGAGATC GACGAACTCT CCGACGCTGA CGTCATCTTC
TACGAGACCG ACGCCCAGGA GAACCCCGAC CCGTTCACCG AGGCGCTGCT CGAGCAGAAG
CTGTGGCAGA GCCTGCCCGC GGTGGAAGCC GGCCAGGTCC ACCCCCTGCG CTACAGCGCG
GCCCGCACCT ACGCCCAAGC CAACATCGTC CTCGACCAGA TCGAAGAGGT CCTCAAGGGC
CTATGA
 
Protein sequence
MGLGKPSTTL YRSLRQGLPN LIVVVGHWPP TRRKRSRVQQ KALRSGLVLG AGALALSLTL 
TACGDAQEAA DTPAQGDTVT VETDYGTVEI PADPQRIVAL EFGTEVVLEA GIEPVGVIEP
VATLYTAEEF EQLSTYPVVQ SASLEINMEA IAEAQPDLII GGVRVESHDE YVGIREDLEK
IAPTVFFDFD GAGSGLRNMT LELSRVVGDG ERAEAEQQRF EERVEEISTA YADQLADTTF
ALVFGVDGEF AVVNTNAWGG EILHTLGAKQ SKAQQPAGEN FAAFYSYEEI DELSDADVIF
YETDAQENPD PFTEALLEQK LWQSLPAVEA GQVHPLRYSA ARTYAQANIV LDQIEEVLKG
L