Gene Tfu_1856 details

Gene Information

• Locus tag: Tfu_1856
• ID: 3579535
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 2163292
• End bp: 2165352
• Gene Length: 2061 bp
• Protein Length: 686 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 637685548
• Product: prolyl oligopeptidase
• Protein accession: YP_289912
• Protein GI: 72162255
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1505] Serine proteases of the peptidase family S9A

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.149667
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCCAGCA ACCCGCCGCG TCTCTTGTCG CCTGCTGCTG TCCCTGACCC CTACCGCTGG 
CTGGAGGACG ACGACTCGCC GCGCTGCCTC CGCTGGCTCG CCGCCCGAGA CGCCGAGTTC 
CAGTCAGCTC TCCCGACTTG GCCCCTGCGC GACGCACTCG CCGCGGAGAT CCGCCACCTG 
GTCGCCACCA CCCAGTGGTC TCCGCCCCTG CGGCGCGGCG GTCTGCTGTT CGCCACCCGG 
CGCGACGGCG GCGACGAGCA TCCTCGCCTC GTCGTCATCG AACCTTCGGG CCGCGAACGC 
GTCCTGTTCG ACCCGACCGT CGGCGCCCCG GACGGCACCA CCACCCTCGA CGCCTGGGAG 
CCCAGCCCGG ACGGCACCCT GGTCGCAGTC CAGACGTCGC ACGGCGGGAC CGAACGCGGG 
GAACTGCACG TCCTGTCCGT CGCCACCGGC AGGCCCGTCG AACCTCCGAT TCCCGGGGTC 
CGCTACGCCC ACGTGGCGTG GCTGCCCGCC TCCTACGGAC CGGCGTTCTA CTTCGTGCGC 
CGCGACAGCG CTAACGGGCG GCGCGGTGTG TGGCTGCACC GGGTAGGCCG CAAGGAGGAC 
ACGCTGGTCC ACCCGTGCCA AGCGGCACGC ACCGTGCCCG GCGTGCGACT CCACCGCGAC 
CGGTGGCTCG TCGTCACCGA AAGCCACGGC ACCGGGCACC GCAACGACCT GTGGCTGGCC 
GACTTGGCCG CGAGCCCGCC CGAAGCTCCC GTGCTGCGGC CGGTGCACGT GGGCCGCGAC 
GTGGAATCGG AGGCCACGAT AGGCCCAGAC GGCCTGCTGT ACCTGCGCAC CACCTGGCAT 
GCCCCGCTGC GCCGGATCTG TGTGGCCGAC CCGGCCGCCC CCGCCCCGGA ACACTGGCGG 
GAAGTGGTCC CCGAGGCCCC GGACGCCCTC CTCGACGGGT TCGCGGTGGC GGGCCGTGCC 
GACGCCGTCG ACGTGGTGTA CACCCGCACC CGGCTCGGCA TCAGCGAACT GCGCGTCCAC 
ACCCCCGGCA GCGCCCGCGC CGACTGGGTG GTCCCCCTGC CCGGGGAAGG CATGGTCGCC 
CAGGTAACCG CGGACACCAG CGGGGAGGTG TACTTCTGCT ACGCCGACGT GGCCACCCCG 
TTGACGGTGT TCACGCTCGG GGCGGACGGC GTCCCCGTCC CTTGGCCACC GCACGCGGCC 
TCCCTGCCCC CGCGCACCCC GATCGAACGG CGCAGCCTGT CGTACCTGTC CTTCGACGGG 
GTCCGGGTGC CCCTCACGAT CTTTGCGCTT CCCGGCACCC CGCCGGGCCC CACCATCCTG 
CACGCCTACG GCGGATTCGG CCGCCCTCGA CAGTTCGGGT TCTCCGCCAC CGTGCTGGCC 
TGGCTGCGCC ATGGCGGCCG CTACGCCGTG GCACACGTGC GCGGCGGCGG CGACTTCGGC 
CGCACCTGGC ACCTCGCCGG TGCTGGACGG CACAAAGTAC GCGCGGTCCG CGACCTGGTC 
GCCGCCGCGG ACTTCCTTGT CGCCCGGGGA GAGTGCCGCC GCGACGAACT GTGCCTTTCC 
GGCGGCTCCG CCGGCGGTCT GCTCGTGCTG GCCGCGATCG CCCGCCGCCC GGACCTGTGC 
GCCGCAGTCA TCGCGTTGGC CCCGCTCGCG GACATGATCC GCTTCCCGCA GCTCGGCTTG 
GGCGCGATGT GGAGCCGCGA ATTCGGCAGC GTCACCGACC CCGAGGATTT CGCGGCACTA 
CTCGACTACT CCCCCTACCA CCGGGTGCTC CGCACTCCGC CCGCCGCGTA TCCGGCGGTG 
CTCCTCACCG GTTTCCACGG CGACACCCGC ACCGGCCCTG CCCATCCCCG GAAGATGTGC 
GCGGCCCTCC AAGAACGGAC GCGCGGCCCG CGTCCCATCC TGCTGCGCTA CGAGCACGGG 
GTGGGCCACG GGCCGCGCGC GGTCAGCCGC GCGGTCGAAC TCGCGGCCGA CGCCCATGCG 
TTCGCGGCCG CGCAGACAGG GCTGTCCCCG ACCCGCCGGC CCTCGGCGGG CGCGGCCCTC 
AGCACGCAGC AAGGGAGGTG A 

 

Protein sequence

MPSNPPRLLS PAAVPDPYRW LEDDDSPRCL RWLAARDAEF QSALPTWPLR DALAAEIRHL 
VATTQWSPPL RRGGLLFATR RDGGDEHPRL VVIEPSGRER VLFDPTVGAP DGTTTLDAWE 
PSPDGTLVAV QTSHGGTERG ELHVLSVATG RPVEPPIPGV RYAHVAWLPA SYGPAFYFVR 
RDSANGRRGV WLHRVGRKED TLVHPCQAAR TVPGVRLHRD RWLVVTESHG TGHRNDLWLA 
DLAASPPEAP VLRPVHVGRD VESEATIGPD GLLYLRTTWH APLRRICVAD PAAPAPEHWR 
EVVPEAPDAL LDGFAVAGRA DAVDVVYTRT RLGISELRVH TPGSARADWV VPLPGEGMVA 
QVTADTSGEV YFCYADVATP LTVFTLGADG VPVPWPPHAA SLPPRTPIER RSLSYLSFDG 
VRVPLTIFAL PGTPPGPTIL HAYGGFGRPR QFGFSATVLA WLRHGGRYAV AHVRGGGDFG 
RTWHLAGAGR HKVRAVRDLV AAADFLVARG ECRRDELCLS GGSAGGLLVL AAIARRPDLC 
AAVIALAPLA DMIRFPQLGL GAMWSREFGS VTDPEDFAAL LDYSPYHRVL RTPPAAYPAV 
LLTGFHGDTR TGPAHPRKMC AALQERTRGP RPILLRYEHG VGHGPRAVSR AVELAADAHA 
FAAAQTGLSP TRRPSAGAAL STQQGR