Gene Tfu_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1816 
Symbol 
ID3579107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2116249 
End bp2117091 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content69% 
IMG OID637685508 
Producthypothetical protein 
Protein accessionYP_289872 
Protein GI72162215 
COG category[L] Replication, recombination and repair 
COG ID[COG2887] RecB family exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCCG CACCGTCCCC CGTGCCGCTG CGGGCCCTCT CCCCGTCGCG GGCCACCGAC 
TTCATGCAGT GTCCCCTGCT GTTCCGGTTC CGGGTGATTG ACCGGATTCC TGAGCCGCCG
AGTCCGGCGG CTCGGCGCGG CACGCTCGTC CACGCGGTGT TGGAGAAGCT GTTTGAGCTT
CCTGCGGAGT CGCGGACGCC GGATGCGGCG CTTGCGTTGC TGGAGCCGCA GTGGGAGCGG
ATGCGGGAGC AGGAGCCTGA TGTCGAGGCG ATGTTCCCTG ATGCGGAGGC GTTGGCGGCC
TGGTTGGAGG AGGCGCGCGC GCTGGTGCGG CGCTATTTCG ACTTGGAGAG CCCGCAACGG
TTGGAGCCTC AGCAGCGTGA GGTCCGCTTG GAGGTTCCGT TGGAGTCGGG CCCGCTGCTG
CTCGGCTATG TCGACCGAGT GGATGTGGCG CCCACGGGGC AGGTGCGCAT CGTCGACTAC
AAGACGGGGA AGAGTCCGGC TCCGCGTTAC GAGGACAAGG CCCGGTTCCA GATCTTCTTC
TACGGGGTCA TGGTGTGGCG GGAGACCGGT CGGGTACCCG ACCGGCTGCA GCTCCTGTAC
TTGGGGGACG GGGCGGTGCG CTGGTACGAC CCGACCGAGG AGGAGATGCG TAACGCGGAG
GCGCATATCC GCGCGGTGTG GGACACGATT GTGGAGACTG CTCGCACGGG GCGGTGGCTG
CCGCGCCGGT CGCCGCTGTG CAACTGGTGC GACCATCGGG CGCTGTGCCC GGCGTTCGGG
GGGACTCCTC CCCCGCTTCC CCAGCAGGCC GCGCAGGATG TCGTGAAGCC GCTCGCGTCC
TGA
 
Protein sequence
MSSAPSPVPL RALSPSRATD FMQCPLLFRF RVIDRIPEPP SPAARRGTLV HAVLEKLFEL 
PAESRTPDAA LALLEPQWER MREQEPDVEA MFPDAEALAA WLEEARALVR RYFDLESPQR
LEPQQREVRL EVPLESGPLL LGYVDRVDVA PTGQVRIVDY KTGKSPAPRY EDKARFQIFF
YGVMVWRETG RVPDRLQLLY LGDGAVRWYD PTEEEMRNAE AHIRAVWDTI VETARTGRWL
PRRSPLCNWC DHRALCPAFG GTPPPLPQQA AQDVVKPLAS