Gene Tfu_1795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1795 
Symbol 
ID3580554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2096318 
End bp2097877 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content71% 
IMG OID637685489 
Producthelix-turn-helix, Fis-type 
Protein accessionYP_289853 
Protein GI72162196 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms 
COG ID[COG2508] Regulator of polyketide synthase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGTACG CACAGTTTGC GGGCGGCAGA CCGCTCACTA TGCGCGCTTT GACCGCCCGA 
CCTGACCTGG AAATCCGGAT CCGCGCCGGC CACGGCGGAC TGGACCGCAC CGTGCGCTGG
GCCCACGTCA CCGAACTCCA CGACCCGGTG CGGTGGCTCC GCGGTGGAGA ACTCGTGCTG
ACCGTGGGGT TAAACGTCGG CGCCACGGAA GCAGAACAGC GCGCCTACGT CGCCCGGCTC
GACACCGCGG GATGCGCCGG ACTCGGCTTC GCCCTTGACA CGTGGCTGAC CGAAATCCCG
CCGGCCATGG TGGACGAGGC AGAACAGCGC AACATGCCGC TGCTGTCCGT GGAAGGCAAC
ACCCCGTTCA TCGCGATCGT GGAAGCGGTC GCCGAACACT ACGCCACCGA GCAGCTCCGC
CTGCAAGGCA AAATGCTCAC CGCCCAGGAC GCCATGGTCC GCTCCGCCCT GCGCACGGGT
CTGCCCGGTG TGGTCACGGA ACTCGCCAAA GCAGTCGCCG GGGAAGCCCT TCTCCTCGAC
CAGAACGGGT TGACCACGCA CTCTGTCCCC GGTGGCGAAC ACCCCTGGCA CAGCACGGTG
CGGTCCGCGG TCGTCCTCGA CGGGGACCGG CCGCGCGGCA TGTCGATCCT CGCCGACGGG
GACGCCACCA TCCTCCTACA AAACCTGCGC GCTGGCGGCA GCACCCTCGG CTGGCTGGCG
CTGCGCTGCT CCTCCCCCGC CTCCGCCCCC ACCCGGATGC TCACCAACCA CGCTGCATCC
CTGCTGACCA TGCACCTGCT GCGGTCCCGG GACGCGCGGC GCCTGCACCA CCATGCCCGC
GCCCCGCTGC TGCGCCTCCT CGTCACCGAC CGCACCGCCG GAGCGTCCGC GGCCCGGCTC
CTGACGCTCC CGCCGCCCCC GTTCGAAGTA GTGCACCTGG CCACCGACCG CCCTGACACG
TTGGTCGACC AGGTTGTTGA CGCGCTCGCC GACGTCATGG GCAGCGGCCC AGCCCTCGAC
CGGGCCGCGC TGTGCGCGCT CGACGACGGG GTCCTCGTCG TGCTCCCCGA ATCACGGACC
CGCCCCCGCC TGGGTGAACT CCTCTTCACT GATTTGGCGG CACGTCCGGA AGGCCCGCGT
GCTGCGGGAG CATGCCAGGC CCGCGGCTCG GCGTACCTCG CTGATGCGGC GAACCGCGCC
CGCCGCATCG CCGCTTCCGG TCCCGGCTAC CGGCACGCCG CAGACACCGA AGCATGGTCG
CTGCTGCGCG ACTCCCTTCC CGCGGAAGCA TCCGAAGAAT TCCAGCAAAC CGTGCTGGGC
GCGCTCCGCG AGCACGACGC GCGCAACGGC ACCGAACTCG TGGCCACGCT CCGCTCCTAC
CTGGAGCACA ACTGCGGGAT CGAAGCCACC GCCCGCGCCT TGGGCGTGCA CCGCAACACG
CTGCGCGCCC GGCTGCGCAC CGCGGAACGA GTCATGGGCC GTTCCTTGGA CGTGCCCCGG
CACCGCCTGG AACTGTGGGC GGCCCTCGCA TTGGATGCGG GCAGTGCTCC CGGCCCGTAG
 
Protein sequence
MQYAQFAGGR PLTMRALTAR PDLEIRIRAG HGGLDRTVRW AHVTELHDPV RWLRGGELVL 
TVGLNVGATE AEQRAYVARL DTAGCAGLGF ALDTWLTEIP PAMVDEAEQR NMPLLSVEGN
TPFIAIVEAV AEHYATEQLR LQGKMLTAQD AMVRSALRTG LPGVVTELAK AVAGEALLLD
QNGLTTHSVP GGEHPWHSTV RSAVVLDGDR PRGMSILADG DATILLQNLR AGGSTLGWLA
LRCSSPASAP TRMLTNHAAS LLTMHLLRSR DARRLHHHAR APLLRLLVTD RTAGASAARL
LTLPPPPFEV VHLATDRPDT LVDQVVDALA DVMGSGPALD RAALCALDDG VLVVLPESRT
RPRLGELLFT DLAARPEGPR AAGACQARGS AYLADAANRA RRIAASGPGY RHAADTEAWS
LLRDSLPAEA SEEFQQTVLG ALREHDARNG TELVATLRSY LEHNCGIEAT ARALGVHRNT
LRARLRTAER VMGRSLDVPR HRLELWAALA LDAGSAPGP