| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1729 |
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| Symbol | |
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| ID | 3581668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 2010862 |
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| End bp | 2013375 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637685423 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_289787 |
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| Protein GI | 72162130 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCGAC GTTCACTCTG GTCGTTTCTC ATAGCAGGGT TTTTCGCGCT GGTGGCCGTG
GCTCCACAAC TGCTGGCCGC CTACCAGGTC ACTGTGCCCT GGGCAGTGAC TGTGGCTACC
GTGATCGCCG CATTGGCCGC ACTAGCGCTG GGGGCATGGC AGCACCGCTA CGAGCAGGAC
GCTACACGCC GTGACGAGCA AGATCGTGCC CTCAGCGAGG GCTGTCTGAC CTTACCTTCG
GGCAGGCTCC CCAAAGTCCG GGATTTCAGT AACCCCCGAG ACTGGGGGGT GCACCCTGCT
GCCACTAGCG GTGCAACCGC GTCGATACCG CCTTTCGTGC CCCGTGACGT TGACGAAGAG
CTCCGCACCC ACCTTGCCAC GAGTACGTTT GTGCTAGTGG TGGGGGACTC CACCGCAGGC
AAAACCCGGT GCGCTTTCGA AGCAGTCCAA GCCGTACTTC CTCACCACAC TCTCATCATC
CCCACCACTG TCTCAGGGAT TGCCGCTGCT TTGCGGGCCG CTGAGCAGCA CCCCAAGTGC
GTGCTGTGGC TCAACGACAT CAACACCTGG TTTTCTGCCC CCGAGCTGAC CCGGGAAGCT
GTCTCTCGGC TGCTCGCCCC CGCTCGCCGT GGGCACCGCG TCGTAGTGGC CACTCTGCGT
GCCGCTGAAG AGAATCAGTG GCGCACTATT CCCGAGGACA GCGCGGTCGC AGACACTCAT
CGCAAGGTCC ACGACCTGCT GAGCCGCGCC CACCGTATTT TCCTGCCCCG CCTGTTCACC
CCCGCTGAGC GGGAACGCGC CCGGAACTAT GCCCGCGATC AGCGGATCGC CGACGCTTTG
CAGCAGGCCG ATGAATACGG GATCGCTGAG TACCTGGCCA ACGGCCCCCA ACTGCTGGCG
GAATGGGAGA GCGCGTGGAG TGCGAACACC GATCCCCAGG CGCCCAGCCA CCCTCGCGGC
GCCGCTCTCA TTGCAGCCGC TGTCGACCTA CGCCGCGCCG GCTATGCTTC CGTGCTCCCC
CGGCGTCTCA TCGAGGAGGT GCACGGCCAC TACCTTGACC AGCAGGGCGG CCACCGGCTC
AACCCCGAGG CCCTGGACGA CGCCTGGCAG TGGGCCACCC GCCCACGCCG TGGCACCACC
CGTCTTCTCA CTCCCCACGA TCCTGACCAC GTCGACGTGT TCGACTATCT GGTCGACTCC
GTCCAACGCC GCACCCGGGC AGGTGATCAC GTGCCCGAAC ACGTCATCAC CACCGCTCTG
ACCTACGCCG CCGCGACCGA CGCCCACTCC ATCGGTATTA CCGCCAAAGC CGACGGCCGC
TACCGACTAG CCGAACACGC CCACCGCCAG GCCTACACCA CACGCGCTGA CGAGCACGGC
CCCACCCATC CCGACACCCT GGATAGCCGC AACAACCTCG CCCTGGCCCT GCACGACCTG
GGACGTTTGG AAGAAGCCGA GACCGAGTAC CGTGCCGTCC TCGACGCCCA CCGCCGCATC
CTCGGCGACA ACCACCACCG CACCCTCGCC ATCCGCAGCA ACCTCGCTTC ACTCCTGCAA
GCCCTAGGAC ACTTCGAGAA AGCCGAGGCC GAATACCACG CTGTGCTCGA CGCCCACCGC
CGCATCCTCG GCGACAACCA CCCCCACACT CTCACCATCC GCAGCAACCT CGCTTCACTC
CTGCAAGCCC TAGGACACTT CGAGAAAGCC GAGGCCGAAT ACCACGCTGT GCTCGACGCC
CACCGCCGCA TCCTCGGCGA CAACCACCCC CACACTCTCA CCATCCGCAG CAACCTCGCT
TCACTCCTGC AAGCCCTAGG ACACTTCGAG AAAGCCGAGG CCGAACACCG CGCTGTGCTC
GACATCCGCC GCCGCATCCT CGGCGACAAC CACCCCCACA CTCTCACCAT CCGCAGCAAC
CTCGCTTCAC TCCTGCAGGG TCAAGGACGC TTGGTAGAGG CCGCGGCCGA ATACCACGCT
GTGCTCGACG CCTACCGCCG CATCCTCGGC GACAACCACC CCGACACGCT CGCCATCCGG
GGAAGCCTGG CCTCAGTCCT GCAGGCCCTG GGGCATCTCG AGAAAGCCGA GGCCGAATAC
CACGCTGTGC TCGACGCCTA CCGCCGCATC CTCGGCGACA ACCACCCCGA CACGCTCGCC
ATCCGGGGAA GCCTGGCCTC AGTCCTGCAG GCCCTGGGGC ATCTCGAGAA AGCCGAGGCC
GAACACCGCG CTGTGCTCGA CGCCTACCGC CGCATCCTCG GCGACAACCA CCCCCACACC
CTGATCAGCC GCAACAACCT CGCTTCACTC CTGCAGGATC AAGGACGCTT GGTAGAGGCC
GCGGCCGAAC ACTGCGACGT TCTCGCCATC CGCCGCCGCG TCCTCGGCGA CAACCACCCC
CACACCCTGA TCAGCTTGGA AAATGTCGCT TCAGTCCTGC AGGCCCTGAG GCTCTCAGTC
GAAGAACTCC GCGGCGACGA CAGTGACCGC AACGCTCCAG AGTGCCGCGG TTGA
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| Protein sequence | MRRRSLWSFL IAGFFALVAV APQLLAAYQV TVPWAVTVAT VIAALAALAL GAWQHRYEQD
ATRRDEQDRA LSEGCLTLPS GRLPKVRDFS NPRDWGVHPA ATSGATASIP PFVPRDVDEE
LRTHLATSTF VLVVGDSTAG KTRCAFEAVQ AVLPHHTLII PTTVSGIAAA LRAAEQHPKC
VLWLNDINTW FSAPELTREA VSRLLAPARR GHRVVVATLR AAEENQWRTI PEDSAVADTH
RKVHDLLSRA HRIFLPRLFT PAERERARNY ARDQRIADAL QQADEYGIAE YLANGPQLLA
EWESAWSANT DPQAPSHPRG AALIAAAVDL RRAGYASVLP RRLIEEVHGH YLDQQGGHRL
NPEALDDAWQ WATRPRRGTT RLLTPHDPDH VDVFDYLVDS VQRRTRAGDH VPEHVITTAL
TYAAATDAHS IGITAKADGR YRLAEHAHRQ AYTTRADEHG PTHPDTLDSR NNLALALHDL
GRLEEAETEY RAVLDAHRRI LGDNHHRTLA IRSNLASLLQ ALGHFEKAEA EYHAVLDAHR
RILGDNHPHT LTIRSNLASL LQALGHFEKA EAEYHAVLDA HRRILGDNHP HTLTIRSNLA
SLLQALGHFE KAEAEHRAVL DIRRRILGDN HPHTLTIRSN LASLLQGQGR LVEAAAEYHA
VLDAYRRILG DNHPDTLAIR GSLASVLQAL GHLEKAEAEY HAVLDAYRRI LGDNHPDTLA
IRGSLASVLQ ALGHLEKAEA EHRAVLDAYR RILGDNHPHT LISRNNLASL LQDQGRLVEA
AAEHCDVLAI RRRVLGDNHP HTLISLENVA SVLQALRLSV EELRGDDSDR NAPECRG
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