Gene Tfu_1697 details

Gene Information

• Locus tag: Tfu_1697
• ID: 3580878
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 1972509
• End bp: 1974404
• Gene Length: 1896 bp
• Protein Length: 631 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637685391
• Product: ABC-type multidrug transport system ATPase and permease components
• Protein accession: YP_289755
• Protein GI: 72162098
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCATGG AGATGACGGC GTGGCACGCG CTGTACCACA CCACCCAGGC CCCTGAGGAG 
CGGCGCCCGC TGTCCTTGGC CACCCTGCGG AGGATCGGGG GATTCGCCCG CCCGCACGCG 
GCGCTGCTGG GCTCTTTTCT GGTGTGCAGC GTGCTTGGCT CGGTGCTGGC GGTGGCGACC 
CCGGTGGTCG CAGGCCAGGC AGTCGACGGC ATCGTCGGGG GTGCCCCCAT CGGCGTTGTC 
GGGGGATGGG CGCTGCTCAT CGCCGGTATC GCCCTGGCCG AGGCGGGGGT GGGGCTGGTC 
GCGCGGTGGC TGTCGGCGCG GATCGGTGAA GGGCTCATCC TGCGGTTGCG GACCGCAGTC 
TTCGACCACG TACAGCGCAT GCCGATCGCT TTCTTCACCC GCACCCACAC GGGTGCTCTG 
GTCAGCCGGT TGAACAACGA CGTCATCGGC GCACAGCGGG CGTTCAGCGA CACCCTGTCC 
GGTGTGGTGG GCAACGTGGT GACGCTGGCG TTGACCCTGG TAGTGATGGT GGGGCTGTCG 
TGGCAGGTCA CGGTGGCGGC ACTGGTCCTG CTGCCCGTGT TCGTGCTGCC CGCGCGCCGC 
GTGGGTTTCC GCCTTGCCCG GCTGGAGCGG GAGGCGGCCG AACACAATTC GGCGATGAGC 
ACGCGGATGG CCGAACGCTT CTCCGCTCCC GGGGCAGCCC TGGTCAAGCT GTTCGGGGAC 
CCAGGGCGGG AGTCGGCGGA GTTTGCTGCC CGAGCCACGC GCGTCCACGA CATCGGAGTG 
CGCCAAGCCA TGCTGGAGCA CGTGTTCTTC ACCGCGCTGA CCCTCGTCTC CGCGCTGGCG 
TTGGCGCTGG TCTACGGGCT GGGTGGCTTT TTTGCGCTGC GCGGCCACCT GGATGCCGGG 
GCGGTGGTGG CGCTCGCCCT CCTGCTGACC CGCTTGTACG CTCCGCTGAC GGCCCTGGCG 
CATGCGCGAG TGGAGATGAT GGGGGCGCTT GTCAGCTTTG AGCGGGTTTT CGAGGTCCTG 
GACCTGGAAC CGCTCATTCA AGAGCGTGCG GCTGCCCGAA CGGTGCCGGA GGGGCCGGTG 
TCCGTGGAGT TTGACCGGGT ACGGTTTGCC TATCCGGCCC CGGACGAGGT TTCGCTGGCC 
TCCTTGGAGG AGGTGGCGCA GCTGGAGGCG CGCGGCGGAG CGGACGTGCT GCACGGTGTG 
TCGTTCCGTG TGGAACCGGG GCAGCTGGTA GCCCTGGTCG GGTCCTCGGG GGCGGGAAAA 
TCGACGATTG CGCACCTGTT GGCTCGGTTC TACGACGTGG ACGAGGGCGC GGTCCGGCTG 
TCCGGGGTCG ATGTGCGGGA CCTGTCGTTT GCGTCCCTGC GTGCCACCGT GGGCATGGTG 
CCCCAAGACG GGCACCTGTT CCACGACACC ATCCGCGCTA ACCTGCTGCT GGCTCGGCCG 
CAGGCGAGTG AGGAGGAGCT GTGGGAGGCG CTACGTCGGG CACGGGCTGC TGACCTTGTC 
GCGGCGCTGC CCGACGGTCT CGACACGGTG GTGGGTGAGC GTGGTTACCG CTTTTCCGGC 
GGGGAACGCC AACGGCTCGC CCTTGCCCGG CTGCTGCTGG CTCGGCCCCG CGTAGTGATC 
TTGGACGAAG CCACCGCGCA CCTGGACGCC GACTCGGAAG CACAGGTCCA GGAGGCGCTC 
GCCGAAGCAC TGGCGGGACG CACCGCGCTG GTGATCGCCC ACCGGTTGGC CACGGTCCAG 
ACCGCTGACC TCATCGTGGT GGTGGAGGAC GGGCGGATCG TGGAACGAGG CACCCACGTC 
GAACTGCTCG CCGCGCGCGG CCGCTACGCG CAGCTCTACT GGACCCAGTT CGCGCAGCCC 
GCAGGGGGGC AGGCCGCCGA CGGCTCGTAT GCGTGA 

 

Protein sequence

MSMEMTAWHA LYHTTQAPEE RRPLSLATLR RIGGFARPHA ALLGSFLVCS VLGSVLAVAT 
PVVAGQAVDG IVGGAPIGVV GGWALLIAGI ALAEAGVGLV ARWLSARIGE GLILRLRTAV 
FDHVQRMPIA FFTRTHTGAL VSRLNNDVIG AQRAFSDTLS GVVGNVVTLA LTLVVMVGLS 
WQVTVAALVL LPVFVLPARR VGFRLARLER EAAEHNSAMS TRMAERFSAP GAALVKLFGD 
PGRESAEFAA RATRVHDIGV RQAMLEHVFF TALTLVSALA LALVYGLGGF FALRGHLDAG 
AVVALALLLT RLYAPLTALA HARVEMMGAL VSFERVFEVL DLEPLIQERA AARTVPEGPV 
SVEFDRVRFA YPAPDEVSLA SLEEVAQLEA RGGADVLHGV SFRVEPGQLV ALVGSSGAGK 
STIAHLLARF YDVDEGAVRL SGVDVRDLSF ASLRATVGMV PQDGHLFHDT IRANLLLARP 
QASEEELWEA LRRARAADLV AALPDGLDTV VGERGYRFSG GERQRLALAR LLLARPRVVI 
LDEATAHLDA DSEAQVQEAL AEALAGRTAL VIAHRLATVQ TADLIVVVED GRIVERGTHV 
ELLAARGRYA QLYWTQFAQP AGGQAADGSY A