| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1677 |
|---|
| Symbol | |
|---|
| ID | 3581297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 1951005 |
|---|
| End bp | 1951976 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637685371 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_289735 |
|---|
| Protein GI | 72162078 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.929905 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCTG ACGCACGCCA GCGGGAAGCG CTGCGCCGTC TCACCCTCAC CGTGACCCGG
CGGCTGCACG GGCTGCTACA CGGCGAACAC CTCGGGCTGC ACGCGGGCCC CGGCAGCGAG
CCGGGGGACG CACGGCTCTA CCAGCCCGGA CAGGACGATG TGCGGCGGAT GGACTGGGCG
GTCACCGCAC GCACCACCCA CCCGCACGTC CGGGACTTGG TCGCCGACCG GGAGCTGCAC
ACGTGGACCT TGCTGGACTT GTCAGCCAGC ATGGACTTCG GCACCGCGCA GGCCAGGAAA
CGCGACATCG CCATCGGTGC CCTGGCCGCG ATCACCCTGC TCACCCGGCG GGTCGGCGAC
CAGTGCGGCG TCCACCTGCT GAGCGGGGGA CGGGTCGCGC GGTGGCAGGC CCGGCCCGGC
ATGTCGGTCG ACCAGATCGT GGCGGGCGCG CTCGGCCAGC TCAAACAGGC TCCTCCGCTC
CGTCCGGGGG AGCCTCCCCT CCGCTTGGCG GACGCGCTCG CAGACCTGTC GCGCACCCGC
CGCCGCCACG GGCTGCGGGT GATCGTCTCC GATTTCCTGG ACACCCCGCC CGGCGGGGTC
CCCGACTGGC AGACCCCGCT GCGCCGGATG AGCGCCAACT GTCAAACCAT TGCCATAGAA
GTCGTGGATC CCCTGGAACT GGACCTGCCC GCCATAGGAT TGGTCGCGAT GACCGATCCG
GAGACCGGCC GCACTCGCCA CATCCATTTG ACGGAGAAGG TGCGCCAGCG CTACGCCCAC
GCCGCCGCTG AACAGCGTTC TGCTATCGCC GCGGCGCTGC GCGCGTCGGG CGCGGCCCAC
CTGCGGCTGC GCACCGACCG CGACTGGGTC CGCGACATCG CCCAGTTCGT CGTCGCCCAG
CGCCGTACCG CCCACCGGCT GGCCCGGCAC ACCGTGCCCC GACCCGCCAT TCCGACAAGG
ACCGCACCGT GA
|
|---|
| Protein sequence | MTPDARQREA LRRLTLTVTR RLHGLLHGEH LGLHAGPGSE PGDARLYQPG QDDVRRMDWA
VTARTTHPHV RDLVADRELH TWTLLDLSAS MDFGTAQARK RDIAIGALAA ITLLTRRVGD
QCGVHLLSGG RVARWQARPG MSVDQIVAGA LGQLKQAPPL RPGEPPLRLA DALADLSRTR
RRHGLRVIVS DFLDTPPGGV PDWQTPLRRM SANCQTIAIE VVDPLELDLP AIGLVAMTDP
ETGRTRHIHL TEKVRQRYAH AAAEQRSAIA AALRASGAAH LRLRTDRDWV RDIAQFVVAQ
RRTAHRLARH TVPRPAIPTR TAP
|
|---|
| |