Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1660 |
Symbol | |
ID | 3581280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 1930668 |
End bp | 1932545 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637685354 |
Product | dehydrogenase |
Protein accession | YP_289718 |
Protein GI | 72162061 |
COG category | [R] General function prediction only |
COG ID | [COG0579] Predicted dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCAAGG ATGCCCACGG ATTCCTTCGC TGCGCCCGGG TGGAGAAGAG AGCAGGCCGC GCAGGCATCG GGGAGGCCCG TCCTGGACCG TCTGGTCCTC GAGGGAGAGG TGCTCCGCAT CGTCCGTCGC AAGGACCACC CCAGCAGGGA TCAAGGACAC CGCTGACAGC GGCGGTCAGT CCGAGCGCGA GCTTCTCTGC CCTGGCAAGG CCACGCTCAA CGAGGAGCAG CAGCGCCGTA AGCTGGTCCC CGTGGAGACC GTTGCCCGCA TGTGCTGGGG CAGCGAGCTG GAGGGGAAAC CCCGGCTTCA CCCCGTCGGC CGACTGGTCC TCGGATCCGA CATCCCATAA TCCCGGATTG GGGGGAGTGA CACGCCCTCC GAACCCGGGG TTTTCCCTGC TCCGATTCCG GTTCCGGGCC TCCGTTCTTG GCCAGCGCAG CACACGTTCG TGCCCGCCCC GCTGCAGCGG AGGCAGTCTG CGCCGGGGAG ACACCCACCC AGGCGGGAGC GGCTGTCACC GGCTCAGCTA CGGGCTGTTC GCCGTGGTCT TCGCCCGCGA CCGCAGGGCT GCGCACCACT GCATCGACGC GGTCGACTAC CGTCAGGTCG CGGTCGACAA CGGCGCTGAG CCTGGATCGC ACACCTACCG GACAGGAAAC AGGGAGACGG GAATGGCTGA CGAGGTTGTG GGCATCGTCG GCGCCGGCAT CATCGGGCTG GCGATCGGCC GGGAGATCAT CCGCCGGTGG CCAGGCACGC GCGTGGTCGT GCTGGAAAAA GAAGACCGGA TCGCTGCCCA CCAGACCAGC CACAACTCCG GAGTCGTCCA CGCAGGACTC TACTACAAGC CCGGCAGCCT GAAAGCCCGG CTGTGCACAC GCGGTCGGGA GATGCTCCGC GAATACTGCA CCGACCGCGG CCTGCCCTAC GAGGAGTGCG GCAAGCTCGT GGTCGCGGTC AACTCCGAAG ACGTGCGGCG GCTCGACGCC ATCTACGCCC GCGCCGACAG CAACGCGGTG CCCGGGCTGC GCCGCATCGG GCCCGAGGAG ATCCGCGCAA TCGAACCGCA CGCCACCGGG CTGGTCGCCC TGCACTCGCC GCACACCGCC ATCACCGACT ATCCGCTCAT CTGCGCGTCT TTCGCGAAAG ACATCACCGA GGCAGGCGGG GAGATCCGCT GCACTGCGCC GGTCACCCGC ATCCGGGAAG TCAGCGACTC GATCGAGGTT GTCGCCGGCG GTCAGCCGGT GACCGTGGAC CGCCTCATCA TCTGCGCAGG ACTGCACACC GACCGGGTTG CGCGCCTCGC CGGCGACGGG ACCGAACCGC GGATCATCCC GTTCCGAGGC GAGTACATGC TGGTCAAACC AGAGAAGGCG CACATGGTGC GCGGTTTGAT CTACCCGGTC CCGGATCCCC GCTACCCGTT CCTCGGCGTA CACTTCACCC GCCGAGTCTC CGGGGAAGTA GAGGTCGGCC CCAACGCGGT GCTTGCGTTC GCCCGCGAAG GCTACCGGCT CGCCACGGTC AACCTGGCCG ACCTGGGCGC TATCGCCTCC TGGCCCGGGT TCTGGGCGAT GGCCCGCAAA CACTGGGTGA CCGGGCTGAA GGAGATGTAC GGGTCGGTGT CCCAACGCGC CTACATGAAG GCCGCGCAAC GGTATGTGCC GGAGATTGGT CCTGGCGACG TGGTCCGCGG CGGGGCCGGG GTCCGCGCCC AGGCGCTCGA CCGTGACGGC AGCCTTGTCG ACGATTTCCG CATCAATCAA ATGGGGCGTA TTACAGCGGT CCGCAACGCG CCATCGCCCG CAGCAACGTC GTGCATGGCT ATTGCCGAAT ACGTGGTCGA CGTTATTCAC GGCCCAAAAT CCCAGTAG
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Protein sequence | MPKDAHGFLR CARVEKRAGR AGIGEARPGP SGPRGRGAPH RPSQGPPQQG SRTPLTAAVS PSASFSALAR PRSTRSSSAV SWSPWRPLPA CAGAASWRGN PGFTPSADWS SDPTSHNPGL GGVTRPPNPG FSLLRFRFRA SVLGQRSTRS CPPRCSGGSL RRGDTHPGGS GCHRLSYGLF AVVFARDRRA AHHCIDAVDY RQVAVDNGAE PGSHTYRTGN RETGMADEVV GIVGAGIIGL AIGREIIRRW PGTRVVVLEK EDRIAAHQTS HNSGVVHAGL YYKPGSLKAR LCTRGREMLR EYCTDRGLPY EECGKLVVAV NSEDVRRLDA IYARADSNAV PGLRRIGPEE IRAIEPHATG LVALHSPHTA ITDYPLICAS FAKDITEAGG EIRCTAPVTR IREVSDSIEV VAGGQPVTVD RLIICAGLHT DRVARLAGDG TEPRIIPFRG EYMLVKPEKA HMVRGLIYPV PDPRYPFLGV HFTRRVSGEV EVGPNAVLAF AREGYRLATV NLADLGAIAS WPGFWAMARK HWVTGLKEMY GSVSQRAYMK AAQRYVPEIG PGDVVRGGAG VRAQALDRDG SLVDDFRINQ MGRITAVRNA PSPAATSCMA IAEYVVDVIH GPKSQ
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