| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1650 |
|---|
| Symbol | |
|---|
| ID | 3580486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 1920902 |
|---|
| End bp | 1921372 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637685344 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_289708 |
|---|
| Protein GI | 72162051 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2323] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.0747624 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACTCGG TGCTGCGTGC GGTCGCGATC TACGTCATTC TGGTGGTGGT CTTCCGGCTC
GCCGGGAAAC GCAGCATGGC GCAGCTCACC ACATTCGATC TGCTCCTGCT GTTGGTGATT
TCCGAAGCCA CCCAGCAGGC ACTGCTCGGC AACGACTATT CGGTCACCAA CGCCGCCCTG
GCGATCCTCA CCCTGGTCGC CGTGGGACGC ACCGCCGACT TTCTGAGGTG GCGGTTCCCC
TGGTTCGCCC GGCTGACGCA GAGTGTGCCG GTGGTGCTCG TCGCCCAGGG GAAGGTGCTG
GCCGAGCAGT TGGCCAGGAA CCACATCGAC GAAAGCGAGA TCCTCGAAGT CGCCCGCAGC
AGCCAGGGGA TTTCGCGGAT GGAGCAGATC GACTACGCCA TTTTGGAGGA GTCGGGCACG
ATCAGCATCC TGCCGAAACG GAAAGCGCCC ACCAGCCCTC TGGGGGAGTG A
|
|---|
| Protein sequence | MDSVLRAVAI YVILVVVFRL AGKRSMAQLT TFDLLLLLVI SEATQQALLG NDYSVTNAAL
AILTLVAVGR TADFLRWRFP WFARLTQSVP VVLVAQGKVL AEQLARNHID ESEILEVARS
SQGISRMEQI DYAILEESGT ISILPKRKAP TSPLGE
|
|---|
| |