Gene Tfu_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1642 
Symbol 
ID3580478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp1909636 
End bp1910079 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content71% 
IMG OID637685336 
ProductRNA-binding S4 
Protein accessionYP_289700 
Protein GI72162043 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.605711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCACGACC ACGATCCCAG GCAGGAACCG GCCCGTTCGG AAGAACCGCA GAAAACGGCT 
CCTCCGCTCC CGCCCGGTCC CCCCGCTACG CGCGTGGACC GGTGGCTGTG GGCGGTACGC 
CTCACCAAGA CCCGCTCGGA CGCGGCCCAG GCATGCCGGG CCGGGCACGT TCGGGTCAAC 
GACAAGCCCG CTAAACCCGC CACCTCGGTC AAGGTAGGCG ACCGGGTGCG GGCTCGCGTC 
AACGGAGTCA CCCGGATCGT CGAGGTCACC CACATCATCG AAAAACGCGT GGGTGCGCCG 
ATCGCGACCC GCTGCTACAT CGACCACACT CCTGTGGTGC CGCCCGAGCT CGCCGTTCCG 
GTGGCCCGCC GCCCCCGCGG TGCGGGACGC CCCACCAAGC GTGAACGTCG CCAGCTTGAC 
CGGCTGCGGG GCTTCACCCG CTGA
 
Protein sequence
MHDHDPRQEP ARSEEPQKTA PPLPPGPPAT RVDRWLWAVR LTKTRSDAAQ ACRAGHVRVN 
DKPAKPATSV KVGDRVRARV NGVTRIVEVT HIIEKRVGAP IATRCYIDHT PVVPPELAVP 
VARRPRGAGR PTKRERRQLD RLRGFTR