| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1588 |
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| Symbol | |
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| ID | 3581631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1830367 |
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| End bp | 1831065 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637685283 |
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| Product | CRISPR-associated Cse3 family protein |
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| Protein accession | YP_289647 |
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| Protein GI | 72161990 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.0734757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGTGGC TAACCAAGAT CGTTCCTGAC CTGCGCTACC GCCAGACCCG AGCAGACTTC
CGTACCGCTG GAAATCTACA TCGTAAACTC ATCCGGCTTT CTTCTGACCT CGGTGAGGAG
CGGATCGCTA ACCCCCGTCA GCAATCCGGC TTACTGTTCC GCATCGAAGA AACCAGAAAC
GAGCTCTACC TGCTGGTACA GAGTCACTCC CCCCTGCGGG TTGACCGGCT TGGCCCCGGA
TACCACGGGG TCCAGATGCG TAACCTCGAC CCTTTCCTGG CTCGGCTAGA CAAAGGCAGC
CGTGTCCGCT ACCGGATTGT GGCCAGTCCC ACCAAACGAC TCGGCCGGTC CGAGAACAAC
ACCCAACGCC TTGGCCTGAA AGAGCCGCCG AAAAAACCAA GAGAGTACAC CTGGGCTCTG
CGCGGGGCCG CAGCCGAGGA GTGGTGGCAT TCCCGTGCGG CAGCCAACGG ACTGGAACTC
CTCAGCACCT ACGCGCAGAC ACTCGATGAC GTCCGCGACC CTGGGACCGC TGACCGTAGC
CGCAAAATCC GCCACCCAGC CGTGCGCTTC GACGGTGAAG CCGTCATCTC TGACGTCGAC
GCCGTGCGTC ATGCGGTACT TAACGGCATC GGCCGCGGCA AATCCTACGG CTGCGGGCTG
CTCAGCCTCG CCCTAATCGA GGAAGGAGAA CATGGATAA
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| Protein sequence | MTWLTKIVPD LRYRQTRADF RTAGNLHRKL IRLSSDLGEE RIANPRQQSG LLFRIEETRN
ELYLLVQSHS PLRVDRLGPG YHGVQMRNLD PFLARLDKGS RVRYRIVASP TKRLGRSENN
TQRLGLKEPP KKPREYTWAL RGAAAEEWWH SRAAANGLEL LSTYAQTLDD VRDPGTADRS
RKIRHPAVRF DGEAVISDVD AVRHAVLNGI GRGKSYGCGL LSLALIEEGE HG
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