| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1572 |
|---|
| Symbol | |
|---|
| ID | 3581936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 1810236 |
|---|
| End bp | 1811462 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637685267 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_289631 |
|---|
| Protein GI | 72161974 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0527847 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGGT CTTCCATATC TGCCCTGCCG CCGAGCTCTT CCGGTGGTAT TTCGGACCCT
CGTGGTGACC ACCCATCGCT GTGGCGGGTG GCAGGTGATC CGCTTATCCC CGCCATCCGC
GAGGGTGCGC TCTCCGGGTT TCGGGTTGCA GTGAAGGATC TCTTCGCGGT CGCCGGATAC
GCGATCGGAG CGGGAAACCC GACCTGGCTC CATGAAGCCC CGGTGGAAAC AGACCACGCC
CCGGCTGTCC GGGCCCTCCT GCACGCAGGG GCCGACATTG TGGGAATCGT GCAGACCGCT
GAGTTCGCCT ACGGTCTGAC CGGCATCAAC CAGCACTATG GGACACCGCC GAATCCCGCC
TCCCCCGGTC GGGTTCCTGG AGGATCATCG AGCGGGTCAG CCAGCGCCGT CGCCCTCGGG
CTGGCCGATA TCGGCTTGGG AAGCGACACG GCAGGCTCGA TCCGCATACC AGCCTCCTAC
TGTGGGCTGT GCAGTCTGCG CCCCACCCAC GGCATGGTCC CCACTGCCGG AAGCATCGGG
TTGGCTCCCT CTCTCGACAC TGTCGGGTGG ATCACCCGGA CACCACGGCT GCTCAACCGA
GTCTCTGACG TGCTTCTACC GCAGCGCTCC GCGCCACCGA TCCGCCGACT CCTCTTGGCG
GTCGACCTGT TTGATCTGGT TGAACCTGCG GTGCGGGACA TGCTGGTGGA CGAAGCCCAC
GAGTGGGCGC AGCAGACCGG TCTCCCCTTG CACCCTGTGG ACTCCACCTG TGCTGCGCAC
CTGGAAGAGT GGGCGGAAGC GGTGGGCATC ATCCAAGCCG TGGAGATGTG GCAGACTCAC
GGCCGCTGGC TGCGGGAGCA CGCCGGCGCG GTGTCTTCCC TTGTCGCCGA CGCCATCGCC
GCTGGGGAAG CTATTCCCGA AGACTACCTG GAGTGGGCGC AGGAGACGGC CTGCCGCGGG
CGGCGTCTCC TCGCTGAACT GGTTCCGCCC GGCACCGCGC TGGTGCAGCC AGCAGCACCG
ACCACACCTC CCCCACCTGA GCAGGCCATG AGCGACCTCG ACCTGCTCAC AACGACCGTG
ATGTTCGTGT GCGCGGCGAG CATGGCGGGC TTGCCCGTAC TCACTCTTCC CGGGGTGCGC
ACGTCGGCTG GCCCGATCGG GCTGAGTCTG CTCGCGGCTG CCGGAAGCGA CCGTGCTCTC
AGCGCTCTCG TCGCCGAACT TGAATAG
|
|---|
| Protein sequence | MSRSSISALP PSSSGGISDP RGDHPSLWRV AGDPLIPAIR EGALSGFRVA VKDLFAVAGY
AIGAGNPTWL HEAPVETDHA PAVRALLHAG ADIVGIVQTA EFAYGLTGIN QHYGTPPNPA
SPGRVPGGSS SGSASAVALG LADIGLGSDT AGSIRIPASY CGLCSLRPTH GMVPTAGSIG
LAPSLDTVGW ITRTPRLLNR VSDVLLPQRS APPIRRLLLA VDLFDLVEPA VRDMLVDEAH
EWAQQTGLPL HPVDSTCAAH LEEWAEAVGI IQAVEMWQTH GRWLREHAGA VSSLVADAIA
AGEAIPEDYL EWAQETACRG RRLLAELVPP GTALVQPAAP TTPPPPEQAM SDLDLLTTTV
MFVCAASMAG LPVLTLPGVR TSAGPIGLSL LAAAGSDRAL SALVAELE
|
|---|
| |