| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1564 |
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| Symbol | |
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| ID | 3581928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1800887 |
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| End bp | 1802452 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637685259 |
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| Product | Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| Protein accession | YP_289623 |
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| Protein GI | 72161966 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.432522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGGA ACAGGCGCGT CTTGTCGTTT GTGGCATTAG CGGCCAGCGG CTGCTTGTTT
GCGAGTGGCT GCAGCGTGGT GATGTCGTGG GTGTCCGGGG ATGGCCCGCC GGTCGTCCGC
GAAGAGTTCC CGTACGTCAA GGAAGGCGTG ATCTTCCAGG ACACGGGGCA GGATGCGACG
ATGCGGTTCG CTATCACCGG CCTGGAGCGC ACCGACGACT ACACCGTGCT CCACTATGAG
ATCACCTATC CGGACGAGTT TGAGGGTGCG AACCGCAACC TGAGCATGAC CTACACCCTG
GTCGATCCCA TGACGGGGCG GGTGTATCGG CCGTATGTGG ACGACGAGGG GATGAAGTAC
GGGTCGGTGA GTCCCACCGG TAACGGCATG TACCCGGTGT TTCCTGGGGT GACTAACGAG
TACCGGCGCT ATTTTCCGCC GCTTCCCCCG CACGTGCGGC AGGTGACGTT CGTGGGCAGT
GGTTTGGGTG CGATGACGGG GATTCCCGTC CAGGACGTGG ACGAGGAGCG GCCCGAGCCG
GAGAACCCCA ACGGCGGCCA GCACCTGTCG GTGGACCAGC CGCCTGCGGC TGGGGAGAAA
CTCACCTTCG ACAACCGGCG GCCTGATGAG GACGCGGTGG CGGTCGAAGG CTGGGTGGAA
AGCTTTGTGG ACTCGGAGAT CGCGTCGGTG ACCAGGGACG GGACCACGGA GACGATCTCG
CTGCACTCTG ACGTGATGTT CGAGTTTGAC CGGGCTGATT TGACGCCGGA AGCCGAAGCC
GTGGTGCGGC GGGCCGCGGA AACCCTGGAA CGCAACGTCG ACCCTGATCA TCCGGAGATC
ATCATCATCG GCCACACCGA CGGTATCGGC ACTGACGCCT ACAACGACGA TTTGTCGGTG
CGGCGGGCTG AGACGGTGCG TAACCTTCTG GTGGAGGAGA TGGGCACCGG CTACACCTAT
GTGGTGGAAG GCCGCGGTAG CCGGGAGCCG ATTGCGCGGG AAGGCGGCCC GGATGACGAG
CAGGCGCGGG CCCGTAACCG GCGTGTGGAG TTCTCCTACA CCATCCGGAT GCCCGGGGGT
GGCGAGGAAG AGACCGATGA CGGGCTGGGG GTGGCCGGGC AGCACGTGTC GTGGCCGGCG
CCGTTCACCG ACGACCCGGG TGAAGTGGTG GCCAGTGTGG AGCGGGACGG GGTGCGGTTG
GACGTCTATC CGCTCCGCCG CGATGGTGCT TTTGTGGTGG GAACGGTGAC GTTCACCAAC
CTCACGGATA CGCCCGTGGA TCCCGGGTTG ACGGGTTTTG CGGTGGCTGG CGGGCCGGAA
CGGTTCAGTA AGGGAACCTT GGGCGGTTTC CAAGTGGTGG AGCCGGAAAG CGGCCTGGTG
CGGTATGTGG CCCAGATGAA CTTCGGGGAC GGGGTCTACA GCGCGTTCGC TGAGGAGGTG
CACCGGTTGC AGCCGGACCG CACCTACGAG CTGGTGGCGG TGTTTTCTGC GCCTAGTTCG
GAGGTGGAGT CGGTGACTTT GCGTGCTGGA CCGTTCGGGG AGATCCCTGA CGTTCCCATC
GAATAA
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| Protein sequence | MARNRRVLSF VALAASGCLF ASGCSVVMSW VSGDGPPVVR EEFPYVKEGV IFQDTGQDAT
MRFAITGLER TDDYTVLHYE ITYPDEFEGA NRNLSMTYTL VDPMTGRVYR PYVDDEGMKY
GSVSPTGNGM YPVFPGVTNE YRRYFPPLPP HVRQVTFVGS GLGAMTGIPV QDVDEERPEP
ENPNGGQHLS VDQPPAAGEK LTFDNRRPDE DAVAVEGWVE SFVDSEIASV TRDGTTETIS
LHSDVMFEFD RADLTPEAEA VVRRAAETLE RNVDPDHPEI IIIGHTDGIG TDAYNDDLSV
RRAETVRNLL VEEMGTGYTY VVEGRGSREP IAREGGPDDE QARARNRRVE FSYTIRMPGG
GEEETDDGLG VAGQHVSWPA PFTDDPGEVV ASVERDGVRL DVYPLRRDGA FVVGTVTFTN
LTDTPVDPGL TGFAVAGGPE RFSKGTLGGF QVVEPESGLV RYVAQMNFGD GVYSAFAEEV
HRLQPDRTYE LVAVFSAPSS EVESVTLRAG PFGEIPDVPI E
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