Gene Tfu_1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1559 
Symbol 
ID3579512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp1796553 
End bp1797314 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content64% 
IMG OID637685254 
Productputative uvrA-like protein 
Protein accessionYP_289618 
Protein GI72161961 
COG category[L] Replication, recombination and repair 
COG ID[COG0178] Excinuclease ATPase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0605734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCTCGA TCGACCAGAG CGCGATCCGG GGATCGCGGC GCAGCAACCC CGCCACCTAC 
ACGGGCTTGT TGGATCCGAT CCGTAAAGCG TTTGCGAAAG CCAACGGGGT GAAGCCTTCG
CTGTTCAGCG CGAATTCGGA GGGGGCGTGC CCTGCGTGTA ACGGGGCAGG CGTGATCTAC
ACCGATTTAG CGATGATGGC GGGGGTGGCC ACGGTGTGTG AGACGTGTGA GGGCAAACGG
TTCCAGGCTT CCGTGCTGAA GTACACGTTG GGTGGCCGCA CGATCAGTGA CGTGTTGGAG
ATGTCGGTGC GGGAGGCTGA AGAGTTCTTC CGCGCAGGTG AGGCTCGTCT TCCTGCGGCG
CACGCGATCC TCACCCGGCT CGCTGATGTG GGGTTGGGGT ATCTCAGCTT GGGACAGCCG
TTGACGACCT TGTCGGGTGG GGAGCGGCAG CGGCTCAAGC TCGCCACCCA CATGGGGGAC
AAGGGCGGCA TTTATGTGCT GGATGAGCCG ACCACCGGTT TGCATTTGGC GGATGTGGCC
CAACTGTTGG CGTTGTTGGA CCGGATTGTT GATTCGGGGA AGTCGGTGAT CGTCATCGAA
CACCACCAGG CGGTGATGGC GCACGCCGAC TGGATCATCG ACCTAGGCCC CGGGGCAGGG
CATGAGGGCG GCCGGGTTGT TTTCGAGGGC ACTCCCGCGG AGCTGGTCGC CGCGCGTTCC
ACGCTGACCG GGCAGCATCT TGCCGACTAC GTCGGCGCCT AG
 
Protein sequence
MVSIDQSAIR GSRRSNPATY TGLLDPIRKA FAKANGVKPS LFSANSEGAC PACNGAGVIY 
TDLAMMAGVA TVCETCEGKR FQASVLKYTL GGRTISDVLE MSVREAEEFF RAGEARLPAA
HAILTRLADV GLGYLSLGQP LTTLSGGERQ RLKLATHMGD KGGIYVLDEP TTGLHLADVA
QLLALLDRIV DSGKSVIVIE HHQAVMAHAD WIIDLGPGAG HEGGRVVFEG TPAELVAARS
TLTGQHLADY VGA