| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1546 |
|---|
| Symbol | |
|---|
| ID | 3579499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 1782417 |
|---|
| End bp | 1783949 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637685241 |
|---|
| Product | putative acyl-CoA synthetase |
|---|
| Protein accession | YP_289605 |
|---|
| Protein GI | 72161948 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACC CCGAACAGCA GGTCCGCGAA TGGCTCACCG CCTACACCGC ACCCACCATG
AGCGTGGCCC ACCTGCTGTG CGATCGGCAC GACCCGACCC GCACGGCCGT CACCGAAGTC
CAACCCGACC TGTCGTCCAC CACCCTCACC TTCGGTGACC TCTCCCGCCG TGCCGCACAC
CTGTCCGCTG TCCTGGCCTC CCACGGAGTC ACCCCCGGCG ACCGGGTCGC CACCCTGCTG
CCCCTCGGCA TCGACCTGAC CATCAGCGCC GTCGCAGTGT GGCGGCTAGG CGCCGTCCTC
GTCCCCCTCC CCCCGGTGCT GGCCGCCTCC GCCATCGACT GGAGACTGCG CCAAGTCAAC
GCCACAGCCG TCCTCGCCCC CGCCGACCAG ACCAGCAAAC TCACCACCGG CTCCTGGACC
GTGATCGACC CGCACAAGGA AGCCGCCACA CCCCCACCCG ACCCCGCCAC CGTGGGACCC
GACGACCCCC TGCTCATCAG CCACACTCCC GGCATATCCG GGCCCCCGCG GCAAATCACC
GTCCCCGTGC GCGCCCTGGC CGCCTTCCAC ATCCACCACC ACTACGGCCT GCACATCAGC
GACGACGACA TCTACTGGTG CTTCAGCGAA CCCGGCGACC CCCACGGCCT GTACTACGGC
CTGGTCTCCC CCCTCCTTGC CGGACACACC TGCCTGCACC TGCGCGCCGG CTTCGACCCG
GAACTCACCT TGGACGTCAT GGAAACATTC CAGGTGACCC GCCTCGCCGC CGCGCCCACC
ATCTACCGGG CCCTGCGCAC CGCCACGAAA ACCCTGCCCC CCGGCATCAT GGTGCAAGGA
CTCGCCACCA ACGGCGACGA GTTCCGCACC GACCTGTCCG AATGGGCGCT CGGCACCTTC
GGCGTCGGCA TCAGCGACCA CTACGGCCAC CCCGAATCAG GGATCGTCGC CGTCAACGAC
GGGCACGGCG GCCCCCTGAC CGCCCTCCCA GGATTCCGGC TGACAGTCCT CGAGCCGCTC
AGCGACACCC CGGCCGAAAC AGGAGTCCCC GGACGCGTAG CAATCGACAC CCACAACAGC
CCCGCCTGGT GGTTCGCGGG CTACCCGGAC GACCCCCTGG CCACAGCCCA GCACTTCAGC
CCTGACGGAC GCTGGTACCT GACCGGAGAC ACCGGCACCG TGGACGACAC CGGCGCCGTC
CACCTCACCC GCCACAACGG TGAAGTGATC ATCACCTCCG GCTACCGGAT CGGCCCCTAC
GACGTGGAAT CAGTACTGCT GGAACACGAC GCCGTCGACG AAGTCGCCGT CTACGGAATC
CCCGACCCGC TCCGCGGCGC ACTGGTAGCA GCCAACGTCG TCCTCACCCC GGACGCCTCC
CCCAGCGACG AACTCGCCGA GGAGCTCAAA CGCCTCGTCG CTGAACGGTT CGCAGAAACC
GCGGCCCCCC ACCAGGTGAC GTTCGTGCCG CACCTGCCGA AAACCGCGAG CGGCAAACTA
CGCCGCAACC GGCTGCGCGC CAGCGCTGCC TAG
|
|---|
| Protein sequence | MADPEQQVRE WLTAYTAPTM SVAHLLCDRH DPTRTAVTEV QPDLSSTTLT FGDLSRRAAH
LSAVLASHGV TPGDRVATLL PLGIDLTISA VAVWRLGAVL VPLPPVLAAS AIDWRLRQVN
ATAVLAPADQ TSKLTTGSWT VIDPHKEAAT PPPDPATVGP DDPLLISHTP GISGPPRQIT
VPVRALAAFH IHHHYGLHIS DDDIYWCFSE PGDPHGLYYG LVSPLLAGHT CLHLRAGFDP
ELTLDVMETF QVTRLAAAPT IYRALRTATK TLPPGIMVQG LATNGDEFRT DLSEWALGTF
GVGISDHYGH PESGIVAVND GHGGPLTALP GFRLTVLEPL SDTPAETGVP GRVAIDTHNS
PAWWFAGYPD DPLATAQHFS PDGRWYLTGD TGTVDDTGAV HLTRHNGEVI ITSGYRIGPY
DVESVLLEHD AVDEVAVYGI PDPLRGALVA ANVVLTPDAS PSDELAEELK RLVAERFAET
AAPHQVTFVP HLPKTASGKL RRNRLRASAA
|
|---|
| |