| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1537 |
|---|
| Symbol | |
|---|
| ID | 3581711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 1773947 |
|---|
| End bp | 1774435 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637685232 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_289596 |
|---|
| Protein GI | 72161939 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.156028 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACA GCGAGTTGGA GTTTTTCGAC AGCCTGCCGC GGACCCGGGG TGCGGCGAGT
GCGTTGCTGC GCGACGAGGC GGGGCGGGTC CTGCTGGTCA AGCCCACCTA CCGGCCCGGG
TGGGGGCTGC CGGGCGGGGT GATTGAGATG GGGGAGTCTC CGCGGGAGGC GTGTTTGCGG
GAATGCTCCG AAGAGCTCGG GTTCACCCCC CAGTTGAGTG GGCTGGTGTG TGTGGACTGG
CTACCTGCCC AGGCGAGCCC GGACCGGCGG CCAGCGACCG TGTTCGTGTT CGGTGGTCTG
CTGCGTCCCG GCCAGTTTGA GGCGGTGCGG CTGCCCCCCG ACGAACTCAG CGACGCGCAT
TTAGTGGAGC CGGAGCGGAT CGGCGACTAT CTTCCCGAGC CGCAGGCGCG CCGGGTCGCG
GCGTGTGTGG CGGGCACTGG CTCCACGGTC CGCTACTTGG AATACGGGCA TCCGGTGCAG
TGGGCGTGA
|
|---|
| Protein sequence | MADSELEFFD SLPRTRGAAS ALLRDEAGRV LLVKPTYRPG WGLPGGVIEM GESPREACLR
ECSEELGFTP QLSGLVCVDW LPAQASPDRR PATVFVFGGL LRPGQFEAVR LPPDELSDAH
LVEPERIGDY LPEPQARRVA ACVAGTGSTV RYLEYGHPVQ WA
|
|---|
| |