| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1529 |
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| Symbol | |
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| ID | 3581703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1759226 |
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| End bp | 1762753 |
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| Gene Length | 3528 bp |
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| Protein Length | 1175 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637685224 |
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| Product | hypothetical protein |
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| Protein accession | YP_289588 |
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| Protein GI | 72161931 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | [TIGR03491] RecB family nuclease, putative, TM0106 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0907559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTCCGTG CCGGACCAGT GTGGGTGGTT TCCCCTGCCG ACCTTGTGGA TGTGGTGGAG
TGCCCGCACC GCAGCGTGCT GCACCAGGCG CGGGCCGCGC ATCAGGAGGG CGCTCCCACC
CCTCAGATTG TTGACCCGCT CGCCGGGGAG GCCCGCGAAG AGCTGGTGGA GGCGGAGCTA
CGGCGGCTTC GCGCGCTCTT CGGCGGTGAT GCGGTGGCCA CCGTCGCACC GCCGCGCCCT
GTCCTCGACG AGGTGCACGT CGCTGCTCAG GCGACCCGGG AAGCGATCCG GGACCGGGTT
CCGGTCATCC ACCACGGTGT GGTGGTCGCG CCGATCCAGC CGGGGGTGCT GTTGTTCGGG
CAGGTCGACT TCCTCATCGC GACCACGGTG GACCCGGAAA CCGGGGCCTG CCGGGAGGGT
GTGCCTGCCG GGTATGAGCC GTGGCAGGCG GTGGGGCACG CCACCCCGCG AACCATTGTG
GAGCTTGCGG CGTGCGCCAC CATGCTGGCT GACACCCTCC CGCAGGCTCC CGAGTTTCTG
CATGTGCGCT CAGAGAATGG GCATCATGCG CTGCGGGTCA GCGACTACGT TCCCCTGGTG
GGGGTGGCGC AGGACCGGCT GATACGGCGG CTCGCCGCAC CCCCCGAACT GCCTTCCCCG
GTGTGGGGGG AGCCGTGCCC GGCCTGTGAA ACGTGCGGGT TTGCGACGTG GTGTGCCCAA
GGGCGGGCCC GGGACCGGCA TGTGAGCTTG GTGGCGGGCA TCCGCGGTGA TCAGATCGTG
AAACTTCAAG CCGTGGGAAT CACCACGATT GACGCGCTTG CCCGCGCTGG GGAGGAGCAG
CGGCCGCCGC TGTTGGCGCG CCGCACCTAT ACCCGGTTGC GGGAACAGGC GGCGCTGCAA
GTCCGCCAGG ACGCCACCCG CACCGCAGAC AACCCGACGG GGCGCGTGTT CGCCACCGTG
TATGCCGAGG ACGGGCTGGT GCTGCTGCCT GCCCCCTCGG CTGGGGACGT GGTGTTCACC
GTGGCCACCA CCCCGGTGGG CGACGACGGG GAGTTGGCGT TCCTGTGGGG CGCGTACCTT
CCCAGTGAGG AGCGGCACTG TGTGTGGTGG GCGCACGACC GTGCCGAAGA GCGGGTCGCG
TTCGCTGCGT TCGTGGATTT TGTGAGCGGC CAGTTGCGCG CTGACGGGGA GGCTCACCTG
TACTGTTACA CCCCGCAGGG GGCGAGCCGG CTTGCCGCGT TCGCTGCTTC GCTGGGGGTG
CGGGAAGCCG AAGTGGATGA CCTGCTGCGG CAGCGCCGGT GTGTGGACTT GTCTGATGTG
GTGAAGAAAA GCGTGCGGGT GTCCCAACGC TCCTATGCGT TGTCGGCGCT TGAACCCCTC
TACTTGGGTG ACGATGCTCA ACGGTGGGGT GGGGGCGAGC CGCAGCCCGA CGGGTATGCC
GCCTACCGTC GCGCCTGCCG GGCGGGGGAT TCCCGGCAGG CGCAGGCTGT GCAGGAGGCG
CTTGCTGCCC AGGTGCGCCG CGAGTGCGTG TCGGTGGCGC GGCTGCGTGA CTGGTTGGAA
AAACTCCGGG TCGACCATGG GATCGTGGCT CGACCTGCAC CCCCCGAAAC GGTGGGGGTG
GACCCCGGCC AGCAGGAGCA GGCTGCGGCC CGGCGGGCCG CAGTGGAGGA GCGGATCCGG
TCTTTGACTG AAGCGTTGGC GGGGCCCGCG GCAGGGGAAG GGCGGGGTGA GGACCAGGAC
GCCTGGGATG TGCTGAGTGC GCTGCTCGGC TATTACCGGC GGGAAGAAGC CCCGTTGTGG
TGGGATTTTT TCCGCCGCCT GTCCGCCCCG GTCGAAGAGT TGGAAGCGGA TGCGGACTGT
GTGGTGCCGT TGTGGGTGCG CGCTCATGCG TGGGTGCCCC CGCAGGGGCG GCAGCGTAAA
GCGGCGCGGC ACGTGGAGGT GGGCGCGGAT CCCCGCCGGC TGCATCCTTT TGGGGTGGGT
GACCAGGTGC GACTGTTGTA CCCGGGGGTG GCCGGCCAGG GGGCGGAGGC GGTGCCGGCA
ACGGTGGTGG AGGCTGCGGC CGACCGGCTG GTGGTGGTGG AGAAAGCAGA CGTGGGTGCG
GAGCATGACC GGCAGCCGCT GGCGGTGCTG CCGGGGGCCC CGGTGCGGTC TACACCGAAA
GACGAAGCGT TGTGGGAGGT AGCGGAACGT GTCGCCGCGG CTCTTCCCCG TCCGCCTCAG
ATGGCGGGGG TGGATCTGCT GCGCCGGGTT CCGCCGCGGC TGCGCGGCGG GGGTGCGCTG
CCGGATCCGG GCGACTTCGG TGGGGACACG GTTGCTGCGG TTCTTGCCGC GGTGGACGCG
TTGGACGACT CCTATCTGGC GGTGCAGGGC CCGCCGGGAG CGGGGAAAAC CTATCTTGCT
GCGCGGCTGA TCACCCACTT GGTGGGTCGT GGCCTCCGGG TGGGGGTGTG TGCGACCAGC
CATCAGGCGA TCGAGAACGT GCTGCGCGCG GCGGTGCGTG CCGCAGCGGA GGCCGGGGTG
GGGGTGCCGT GTGCGAAACG CCCATCAGGA GTGTCTCCTG ATAGACGTGT GCCGTGGGAG
CAGCCCAGGC AGGTGCGGGA CTTGGTGCAG TGGTGCCACC GCCAGGAGGG TGGATACCTG
GTGGGGGGAA CCGCGTGGAA CTTTACGCAC CCGCAGATGC GTGGCCTGGG GGTGGATGTG
CTGCTCATCG ACGAGGCCGG GCAGTTTGCG CTTGCGGATG CGGTCGCGGT GTCGGCTGCG
GCTCGTTCGC TGGTGCTGTT GGGGGATCCT CAACAGTTGC CGCACGTGGT GCAGGGGGTA
CACGCGGCGG GCGCGGACCG GTCCGCGTTG GAACACGTGG TGGGGGACGC CGACATTATC
GACCCCGCCT ACGGCTATTT TCTGGCGCAC ACCCGTCGCA TGCATCCGGG GGTGTGCACG
GTGGTGTCCC ACTTGGCCTA CCAGGGGCGG CTCAGTGCCC ACCCTGATGC GGCGTTGCGT
GGCCTAGCCG GGGTGGAGGC GGGCGTGTAC CGCAAGGTGG TGGCGCACCA GGGGCGCAGC
ACGCACAGCC CTGAGGAGGT GCGGGCTGTG GTTGAGGTGG TCGCGCAGTT GGTGGGGCGG
GAGTGGTGTG AGCCGGGGCG GCCGCCGCGG CCGTTGCAGG GCAGCGACAT TATGGTGGTG
GCCCCGTTTA ATGTGCAGGT GCGTGCGTTG CGGGCAGCGT TGGCGGAAGC CGGGCTGGAA
GCGGTGCGTG TGGGCACGGT GGACCGGTTT CAGGGCCAGG AAGCGCCCGT GGTGGTGTGT
TCGATGACGG TGTCGAGTGC GCGGGAAGCA CCTCGGGGCA TGGAGTTTGT GCTGTCCCGC
AACCGGTTGA CGGTGGCGTT GTCGCGGGCC CAAGCGGTGG CTGTGGTGGT GTGTGCGCCG
TCGCTGGTGG AGTCTGCGGC TCGCACGATG GCTGAGCTGC GGGCCTTGGC GGGGTTTGCG
CACGTGTGGG CCCAGGCCCG CGACTGGCCT GACCCGGCCC CAGGGTAG
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| Protein sequence | MFRAGPVWVV SPADLVDVVE CPHRSVLHQA RAAHQEGAPT PQIVDPLAGE AREELVEAEL
RRLRALFGGD AVATVAPPRP VLDEVHVAAQ ATREAIRDRV PVIHHGVVVA PIQPGVLLFG
QVDFLIATTV DPETGACREG VPAGYEPWQA VGHATPRTIV ELAACATMLA DTLPQAPEFL
HVRSENGHHA LRVSDYVPLV GVAQDRLIRR LAAPPELPSP VWGEPCPACE TCGFATWCAQ
GRARDRHVSL VAGIRGDQIV KLQAVGITTI DALARAGEEQ RPPLLARRTY TRLREQAALQ
VRQDATRTAD NPTGRVFATV YAEDGLVLLP APSAGDVVFT VATTPVGDDG ELAFLWGAYL
PSEERHCVWW AHDRAEERVA FAAFVDFVSG QLRADGEAHL YCYTPQGASR LAAFAASLGV
REAEVDDLLR QRRCVDLSDV VKKSVRVSQR SYALSALEPL YLGDDAQRWG GGEPQPDGYA
AYRRACRAGD SRQAQAVQEA LAAQVRRECV SVARLRDWLE KLRVDHGIVA RPAPPETVGV
DPGQQEQAAA RRAAVEERIR SLTEALAGPA AGEGRGEDQD AWDVLSALLG YYRREEAPLW
WDFFRRLSAP VEELEADADC VVPLWVRAHA WVPPQGRQRK AARHVEVGAD PRRLHPFGVG
DQVRLLYPGV AGQGAEAVPA TVVEAAADRL VVVEKADVGA EHDRQPLAVL PGAPVRSTPK
DEALWEVAER VAAALPRPPQ MAGVDLLRRV PPRLRGGGAL PDPGDFGGDT VAAVLAAVDA
LDDSYLAVQG PPGAGKTYLA ARLITHLVGR GLRVGVCATS HQAIENVLRA AVRAAAEAGV
GVPCAKRPSG VSPDRRVPWE QPRQVRDLVQ WCHRQEGGYL VGGTAWNFTH PQMRGLGVDV
LLIDEAGQFA LADAVAVSAA ARSLVLLGDP QQLPHVVQGV HAAGADRSAL EHVVGDADII
DPAYGYFLAH TRRMHPGVCT VVSHLAYQGR LSAHPDAALR GLAGVEAGVY RKVVAHQGRS
THSPEEVRAV VEVVAQLVGR EWCEPGRPPR PLQGSDIMVV APFNVQVRAL RAALAEAGLE
AVRVGTVDRF QGQEAPVVVC SMTVSSAREA PRGMEFVLSR NRLTVALSRA QAVAVVVCAP
SLVESAARTM AELRALAGFA HVWAQARDWP DPAPG
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