| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1473 |
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| Symbol | |
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| ID | 3579485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1702143 |
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| End bp | 1704293 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637685168 |
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| Product | putative pimeloyl-CoA synthetase |
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| Protein accession | YP_289532 |
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| Protein GI | 72161875 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1042] Acyl-CoA synthetase (NDP forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.21292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGCCG TGGTGACCCC CCAGCGGTTG CGGGAGTTCT TCCACCCCCG TTCGTTTGCG
CTCATCGGCG CGAGCGACAA GTCGACCTTC TCCGCGCTGC TGTACCGCAA CCTGGTCGCG
GCCGGCCACG GCGAGGTGAC CTACCTGGTC AACCGCCGGT CGGACCAGGT TCATGGGCGG
CGCGCGTATG CGAGCTGCCG TGACATCGGG TGCCCCGTCG ACCTGGCTTT CGTCATGGTG
CCCGCGCCCG CGGTCGGCGA CGCCCTGCGC GACGCCGCCG CGGCCGGGGT GCGCAGCGCG
CTCGTGCTCA GCTCCGGCTA TGCCGAGGCA GGCGAAGAAG GGCGGCGCCG CCAGCGTGAA
CTGGTGGAGC TTGCCGCCGA GCTCGACCTG CTGCTGCTCG GCCCTAACGT GCTGGGGTTC
ACCAACGTGG CGGCGGGCGT GCCCGCCATG GTGCTCGCCG ACCCGCCCAC GACACCCGGC
GGGGTTGCCC TTATTTCGCA GAGCGGCGCG AGCTGCGGTG CAATGAAAGA CTTCGCGGCG
CTGGCCGGGG TGGAACTGTC CTATGTGATC ACCGTCGGCA ACGAAGCGAT GATCACTGTC
GGGCATCTGA TCGACTACCT CGTCGACGAC GAGCACACTC GGGCCATCGC GGTGTTCATG
GAAGGGATCC GTGAACCCGA GGTGTTCGCC GCGGCGGCCC GCCGTGCCGC GGAAGCGGGC
AAAGCCGTGG TCGTCCTTAA AGCGGGCCGC AGTGAACTGG CTGCGCGGAC CGCTGCCTCA
CACACCGGGG CGCTGGTCGG CGACGACCGG GTCGTCGACG CCGTGTTCGC CCGCCACGGG
GTCATCCGGG TCGACACGAT CGAGTCGATG CTGGTCACCG CCGGGGTGGC AGCGCACACC
GGGCCCTTGG CCCGGCCGGG GGTGGGCGTG GTCTCCATCT CCGGCGGGGC CTGCGACATT
CTCGCGGACC TCGCCCAGGC CGCTGGAGCA GCCCTCCCCG AGTTCACGGC GGAGACGACG
GAGCGGCTGC GCACGGTGAT GCCCTCCTAC GGGAGCGTGC ACAACCCGCT GGACATCACG
GGCGCCGCCA TCCTTGACCC GTCCTTGTGG GAGGAAGCGG TCGCCGCGGT CGGCAACGAC
CCCAATGTGG GGGTCGTGGT CGCGGTCAAC AGCCTGCCCT GGCGGGACAG CAGTGAACCG
TTCTACGGGC AGAAGTATGT GAACGCGATC GGTGCGGGCG CAGCACGCTC CGCCGCCCCC
GTCCTCTACC TCACCCAGGT GACGCAGCCG ATCGGCGCCC AGGCCCGGGC TGTCCTCGAC
GAGGGCGGGG TGGCGCACGT TGTCCCCGGC CTGCACTTGG GCATTACGGC CCTGGCGCAC
CTGGCGCGCT GGTCGCAGGA CCGCGAACAG ATCCTCCGTG AGGTGGTGCC GCCGCCACGG
CGCATCCGTG ACATGGATCC TGTCCCGCTG TCGGAGGTTG CGGTCCGCGC CCTGCTGGAG
GAGGCCGGCG TTCCCGTGGT GCCCGCCCGC CACGTCCACT CGGCGGAGGA GGCCGAGGCG
GCAGCCCGCG CCTTCGGGGG CCGGGTAGCG ATGAAGATCG TCTCCGCGGA CCTGCCGCAC
AAGAGCGACG TGGGCGGGGT ACGGCTGAAT GTGGACGCTG CGGCGGCAGC CGCTAGCTAC
GACAGCCTGC TGGCGGAGTG CACGGCGAAA GCCCCGCATG CCCGGCTTGA CGGGGTTCTG
GTCTCCCCGA TGCGGGATAC GGGACTGGAA CTGCTGGTGG GCGTAACGCG GGACCCCCAG
TGGGGGCTGG TGCTGGCTGT CGGTTTGGGC GGGGTGTTCG TCGAGGTCCT CGACGATGTC
GCCCTCACTC CGCTGCCGGT CTCCCCGGAC CGGATCCGCG CCTTGGTGGA GAGTCTGCGC
GGCGCCGCCC TGATGCACGG GGTGCGGGGC CAGCAGGCAG CTGATCTTGC CGCACTGTCT
GCGACGGTCA GCGCGGTCGG CCGGCTCGCC GAGGAGCTCG GGCCGCGCCT GGAATCCCTG
GAGATCAATC CGCTGCGTGT TGCCGGGGAC CGCATCGAAG CCTTGGACGC GCTCATCACC
TGGCGCGATG CCGCCCCCGC GGCCGTGGGA AAGGAGAGTC GTGCATGCTG A
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| Protein sequence | MTAVVTPQRL REFFHPRSFA LIGASDKSTF SALLYRNLVA AGHGEVTYLV NRRSDQVHGR
RAYASCRDIG CPVDLAFVMV PAPAVGDALR DAAAAGVRSA LVLSSGYAEA GEEGRRRQRE
LVELAAELDL LLLGPNVLGF TNVAAGVPAM VLADPPTTPG GVALISQSGA SCGAMKDFAA
LAGVELSYVI TVGNEAMITV GHLIDYLVDD EHTRAIAVFM EGIREPEVFA AAARRAAEAG
KAVVVLKAGR SELAARTAAS HTGALVGDDR VVDAVFARHG VIRVDTIESM LVTAGVAAHT
GPLARPGVGV VSISGGACDI LADLAQAAGA ALPEFTAETT ERLRTVMPSY GSVHNPLDIT
GAAILDPSLW EEAVAAVGND PNVGVVVAVN SLPWRDSSEP FYGQKYVNAI GAGAARSAAP
VLYLTQVTQP IGAQARAVLD EGGVAHVVPG LHLGITALAH LARWSQDREQ ILREVVPPPR
RIRDMDPVPL SEVAVRALLE EAGVPVVPAR HVHSAEEAEA AARAFGGRVA MKIVSADLPH
KSDVGGVRLN VDAAAAAASY DSLLAECTAK APHARLDGVL VSPMRDTGLE LLVGVTRDPQ
WGLVLAVGLG GVFVEVLDDV ALTPLPVSPD RIRALVESLR GAALMHGVRG QQAADLAALS
ATVSAVGRLA EELGPRLESL EINPLRVAGD RIEALDALIT WRDAAPAAVG KESRAC
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