| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1422 |
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| Symbol | |
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| ID | 3580973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1647128 |
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| End bp | 1648054 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637685119 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_289483 |
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| Protein GI | 72161826 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00195938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGACG TCCGGCGGTT GCAGGTGCTG CGCGCCTTCG CCGAGCACCA CACCGTGGCG
GCGACCGCGG AAGCGCTGGG GGTCACTCCC TCAGCGGTCT CCCAACAGCT CGCCGCATTG
GCCAAGGAAA CCGAAGTCCC CCTGGTGGAG CGGAGTAACC GCCGATTCGT GCTCACCGGG
GCGGGGCGCG TCCTGCTGGA ACGCGCTCAG GTCATCTTCG CTGAACTGGA GCGCGCCCAA
GCCGACCTCG CCCGGTACGC CGAAGGATCA CTCGGATCCG TGCGGGTAGG CGCTTTCGCC
ACCGGCATCT CCAACCTCGT CGCCCCCGCC GTGGCCCGGC TGCGCCACAC CCATCCGGGT
TGGGACTTCT CTGTCATCCA GGCCGAACCC GAACACAGCA CCGAACTGCT GTGCACCGGC
GAGATCGACA TCGCTGTCAC CATGTCCTCG CCGCATCTGC CCGCGACCGG AAGCCCCGGG
TTCCAGTTCC ACCCGGTGAT GGTGGAACCC CTGGACGTGG TCCTGCCCTA CGAGCACCCG
CTGGCGACCA AGATGGAACT CGACCTGGCC ACCGACCTCA ACGACGCCGA CTGGATCATG
TCCGCCCCCG GCACCGTCTG GTTCGACACC GTGGCCGCCG CCTGCCACCA GGCCGGATTC
CATCCCCGCA GCACCCACGT CGTCACCGAC TTCAGTGCGG CGTTCGCTCT CGTCGCCGCA
GGACTGGGCG TGTCCATGGT GCCCCGGCTG GCCTGGCACG GGATAGCGAT CGCCCACATG
GTGGTGCGTC CGGTCCGCAA CGGTCCGCGC CGCCACGTCC TGGCCGTCAC CCGCAGCGGG
GCGAACCCCG AGCCGCTACT CACCGCGATG CGGGAAGCCG CGCACCGGAT CACTGTCCCC
GCGGGCCGGT TCGTCCTCAG CGCCTGA
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| Protein sequence | MIDVRRLQVL RAFAEHHTVA ATAEALGVTP SAVSQQLAAL AKETEVPLVE RSNRRFVLTG
AGRVLLERAQ VIFAELERAQ ADLARYAEGS LGSVRVGAFA TGISNLVAPA VARLRHTHPG
WDFSVIQAEP EHSTELLCTG EIDIAVTMSS PHLPATGSPG FQFHPVMVEP LDVVLPYEHP
LATKMELDLA TDLNDADWIM SAPGTVWFDT VAAACHQAGF HPRSTHVVTD FSAAFALVAA
GLGVSMVPRL AWHGIAIAHM VVRPVRNGPR RHVLAVTRSG ANPEPLLTAM REAAHRITVP
AGRFVLSA
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