Gene Tfu_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1397 
Symbol 
ID3581024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp1619024 
End bp1619818 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content66% 
IMG OID637685094 
Productregulatory protein, MerR 
Protein accessionYP_289458 
Protein GI72161801 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.115331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCGACG GGCGCGTTCA CCGGCAGCAA ACCAATGTTG TGCACGACGC GCCGACGGCT 
GTCGTTGACG CTGCCCACGC TCCGGCTTAC CGTCGGGGGA GTGAGGCCGC CTGCGGTGTC
GAAAACAAGT CGTGTTGTCT CCCCATAGTC CGGTATCGCC GCAGGCCAGG AAGCCGGAGG
TTCGGCGTGG CGGGTATCAG CGGCAAGCAG AACGCCTCCG AGTATCGGCG GTCACCCGTG
CGATGGACGG GTGAAGAATG CCTGCTGTGT GACGAGGACG TAGTGGGGCT GCCGATGAAC
GTCGGATACC GTGGTCCCAC CGCCTGTATG GCAGCGGGAA TCACGTATCG CCAGCTCGAC
TACTGGGCTC GTACTCAGTT GGTCGAGCCC AGTGTGACCG TGCCCGGCAG CTCGCCGGCG
CATCGGCTGT ACAGCTTCCG CGACATCCTC ATCCTCAAAG TCGTTAAACG GCTGCTCGAC
ACGGGGATCT CTCTGCAGCA GATCCGCACC GCGGTCGAGC ACCTCCGACA GCGCGCCACC
GCTGATCTCG CCCACATCAC GTTGATGAGC GACGGGGTCA GCGTCTACGA ATGCACCTCC
CCCGACCAGG TCGTGGACCT GCTGCAGGGC GGCCAAGGCA TGTTCGGGAT CGCGCTGGGA
CGCGTGTGGC GGGAACTGGA GGGCAAGCTC AGCGAGCTGC AGGGGGAGCC GCTCACCGAG
CAGGCCCGCA TCGCCATGGA GGCGTATCCG AGGGACGAGC TGGCGCAGCG CCGCCGACAG
CGCCGCACCG GCTAG
 
Protein sequence
MVDGRVHRQQ TNVVHDAPTA VVDAAHAPAY RRGSEAACGV ENKSCCLPIV RYRRRPGSRR 
FGVAGISGKQ NASEYRRSPV RWTGEECLLC DEDVVGLPMN VGYRGPTACM AAGITYRQLD
YWARTQLVEP SVTVPGSSPA HRLYSFRDIL ILKVVKRLLD TGISLQQIRT AVEHLRQRAT
ADLAHITLMS DGVSVYECTS PDQVVDLLQG GQGMFGIALG RVWRELEGKL SELQGEPLTE
QARIAMEAYP RDELAQRRRQ RRTG