Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1397 |
Symbol | |
ID | 3581024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1619024 |
End bp | 1619818 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637685094 |
Product | regulatory protein, MerR |
Protein accession | YP_289458 |
Protein GI | 72161801 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.115331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTCGACG GGCGCGTTCA CCGGCAGCAA ACCAATGTTG TGCACGACGC GCCGACGGCT GTCGTTGACG CTGCCCACGC TCCGGCTTAC CGTCGGGGGA GTGAGGCCGC CTGCGGTGTC GAAAACAAGT CGTGTTGTCT CCCCATAGTC CGGTATCGCC GCAGGCCAGG AAGCCGGAGG TTCGGCGTGG CGGGTATCAG CGGCAAGCAG AACGCCTCCG AGTATCGGCG GTCACCCGTG CGATGGACGG GTGAAGAATG CCTGCTGTGT GACGAGGACG TAGTGGGGCT GCCGATGAAC GTCGGATACC GTGGTCCCAC CGCCTGTATG GCAGCGGGAA TCACGTATCG CCAGCTCGAC TACTGGGCTC GTACTCAGTT GGTCGAGCCC AGTGTGACCG TGCCCGGCAG CTCGCCGGCG CATCGGCTGT ACAGCTTCCG CGACATCCTC ATCCTCAAAG TCGTTAAACG GCTGCTCGAC ACGGGGATCT CTCTGCAGCA GATCCGCACC GCGGTCGAGC ACCTCCGACA GCGCGCCACC GCTGATCTCG CCCACATCAC GTTGATGAGC GACGGGGTCA GCGTCTACGA ATGCACCTCC CCCGACCAGG TCGTGGACCT GCTGCAGGGC GGCCAAGGCA TGTTCGGGAT CGCGCTGGGA CGCGTGTGGC GGGAACTGGA GGGCAAGCTC AGCGAGCTGC AGGGGGAGCC GCTCACCGAG CAGGCCCGCA TCGCCATGGA GGCGTATCCG AGGGACGAGC TGGCGCAGCG CCGCCGACAG CGCCGCACCG GCTAG
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Protein sequence | MVDGRVHRQQ TNVVHDAPTA VVDAAHAPAY RRGSEAACGV ENKSCCLPIV RYRRRPGSRR FGVAGISGKQ NASEYRRSPV RWTGEECLLC DEDVVGLPMN VGYRGPTACM AAGITYRQLD YWARTQLVEP SVTVPGSSPA HRLYSFRDIL ILKVVKRLLD TGISLQQIRT AVEHLRQRAT ADLAHITLMS DGVSVYECTS PDQVVDLLQG GQGMFGIALG RVWRELEGKL SELQGEPLTE QARIAMEAYP RDELAQRRRQ RRTG
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