Gene Tfu_1392 details

Gene Information

• Locus tag: Tfu_1392
• ID: 3581019
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 1613396
• End bp: 1614043
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637685089
• Product: hypothetical protein
• Protein accession: YP_289453
• Protein GI: 72161796
• COG category: [R] General function prediction only
• COG ID: [COG2071] Predicted glutamine amidotransferases

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.115749
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCCGGC CGCTCATCGG TATCACCAGC TATCTCGGAC CGGCACGCTG GGGACACTGG 
GTGCGTGAGG CGTCTGTTGT CGCCACCCCG TTCCTCCGCG AAGTGGACCG AGCGGGCGGC 
CTGCCCGTCG TGCTCGCTCC CGTCCACCCT CGGCGCATCC CCGACCTGCT GCACCGGATC 
GACGGCTTCG TCTTCACCAC GGGGGCACCT GTGGGGGCCG ACACGGAAGC GGAGAACGCT 
GATCCGCGGC GCGACCGTTT CGAAATCGAA CTCATCCGTG CCGTGCTCGA CGCGGGACGG 
CCGTTTCTCG CGGTCGAACG CGGACTGCAG GTTCTCAACG TCGCCGTGGG CGGCACGCTA 
CTGCCCGCCG CCGACACCGG TCCGGGCCTC GCCGACGCCG AGGTGATCAT CAACGTCAGC 
AGCATGCTGG GCAAGGTGCT GGGTGACCGT GCCCGGGTGC GCTGCGCGGC CAGCCCGGGC 
ATCAACCGCA TCGGGTCGGG CCTGATGCCG GTGGCGTGGG GCGCCACCCA GACCGTGGAA 
GCGGTGGAAG CGGTCGGCCA CCCCTTCGGG GTGGGGGTGC GGTGGCGTCC CGAAGAGGGG 
ACGGACCGTC GCCTGTTCTG CGCGCTCGTC GACTACGCGG CGGGGTGA 

 

Protein sequence

MPRPLIGITS YLGPARWGHW VREASVVATP FLREVDRAGG LPVVLAPVHP RRIPDLLHRI 
DGFVFTTGAP VGADTEAENA DPRRDRFEIE LIRAVLDAGR PFLAVERGLQ VLNVAVGGTL 
LPAADTGPGL ADAEVIINVS SMLGKVLGDR ARVRCAASPG INRIGSGLMP VAWGATQTVE 
AVEAVGHPFG VGVRWRPEEG TDRRLFCALV DYAAG