| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1367 |
|---|
| Symbol | |
|---|
| ID | 3581946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 1582939 |
|---|
| End bp | 1584378 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637685064 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_289428 |
|---|
| Protein GI | 72161771 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACAGCG TGCACTCTCA ACCGAAGGGA TCAACCGTGA GCCAGTCGCT GTCCGCGCAG
GCGATGACCG AGCGCGCGTT GGAGTTGTCG CGTGCTGACG AGTGCATGGT GCTGGTGACC
GAGGCGAGCA CGGCGAACCT GCGCTGGGCA GGGAATTCGC TCACCACGAA CGGGGTGACT
CGGGGCCGGT CGGCCACGGT GATTTCGCTG GTGAAGGATG CGGCGGGGGT CCGGGTCGGC
TCGGTGTCGC AGAGCGGGCT GCGGGACGAC CAGTTGGAGG ACCTGGTGCG CGCCTCGGAG
GAGGCGGCGC GCGGGTCGGC GCCGGTCAAG GAAGCGTATT CGCTGGTGGA TCCTGCGAGC
GCGGAGGCTT CCGGCAGCGA GTGGGATGCG CCGGTTCCGG TCACAGACAT CGGCGTGTTC
TCCGAGTTCG CTCCAGCGCT GGGAAAGGCG TTCGAACGGT CGGCGCAGGC GGGTGTGCGG
TTGTACGGCT ATGCGCAGCA CACGATGTCC GCCACGTTTT TGGGCACGTC GACGGGGCTG
CGGCTCCGCC ACGACCAGCC GTCGGGGACG CTGGACCTCA ACGCCAAGTC GGAGGAGCCG
CACCATTCCA CGTGGGTGGG GCAGGCGACC CGTGATTTCA CGGATGTGGA TGTGGCGGCG
TTGGAAGCCG AGTTGGAGCG GCGGATCTCG TGGGGCCGCA CCACGGTGGA GCTTCCTCCG
GGACGGTATG AGACGCTGCT GCCTCCGTCG GCGGTCGCTG ATTTGATGAC CGACTTGTAC
TGGGAGTTGG GGGCGCGGGA CGCGTTTGAG GGGCGGACCG CGTTCTCGTC GCCGCAGGGC
GGGACCCGGG TGGGGGAACG GTTGTCTCCG CTGCCGGTGC GGCTGCGGTC GAATCCGGCC
GAGCCCGGGT TGGAGTGTGC GCCGTTCGTG CTGGCGGACG CTCCGGGGCG GCGGATCAGC
GCGTTCGACA ACGGGCGTCC GGTGGGTGCG ACGGAGTGGA TCAGCGACGG GGAGTTGGCG
CGCCTGGTCC AAACCTACGA TTCGGCGATG ATGACGGCGC TGCCGTTGAC GCCGGAGGCC
GACAATCTGA TTCTCGAACT GCCGGGTGCG ACCGCGTCGT TGGACGACAT GGTGGCCTCG
ACCGAGCGGG GCCTGCTGTT GACCTGCCTG TGGTACATCA GGATGGTGGA TCCGCGCACC
ATGCTGCTCA CCGGGCTGAC CCGGGACGGG GTTTACCTCG TGGAGGATGG TGAAGTGCGG
GGCGCGGTGA ACAACTTCCG GTTCAACGAG TCTCCAGTGA GCTTGTTGGA GCGGGTGACG
GAGGTGGGGA AGACGACGCC GACGTTCTCC CGCGAGTTCG GTGAATACTT CCCGCTCACG
GCGATGCCGC CAATGCGGGT TCCGGATTTC AACATGTCGT CGGTGAGCCA GGCGTCGTGA
|
|---|
| Protein sequence | MNSVHSQPKG STVSQSLSAQ AMTERALELS RADECMVLVT EASTANLRWA GNSLTTNGVT
RGRSATVISL VKDAAGVRVG SVSQSGLRDD QLEDLVRASE EAARGSAPVK EAYSLVDPAS
AEASGSEWDA PVPVTDIGVF SEFAPALGKA FERSAQAGVR LYGYAQHTMS ATFLGTSTGL
RLRHDQPSGT LDLNAKSEEP HHSTWVGQAT RDFTDVDVAA LEAELERRIS WGRTTVELPP
GRYETLLPPS AVADLMTDLY WELGARDAFE GRTAFSSPQG GTRVGERLSP LPVRLRSNPA
EPGLECAPFV LADAPGRRIS AFDNGRPVGA TEWISDGELA RLVQTYDSAM MTALPLTPEA
DNLILELPGA TASLDDMVAS TERGLLLTCL WYIRMVDPRT MLLTGLTRDG VYLVEDGEVR
GAVNNFRFNE SPVSLLERVT EVGKTTPTFS REFGEYFPLT AMPPMRVPDF NMSSVSQAS
|
|---|
| |