Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1322 |
Symbol | |
ID | 3581768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1532940 |
End bp | 1533929 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637685019 |
Product | hypothetical protein |
Protein accession | YP_289383 |
Protein GI | 72161726 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.140975 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTGCTC TGCCTTTACA GCCAGATATC AGCGAATGTG CAGACTTGGG GACGCTGTAT ACCAACCCCA TTGATTGCTC CAGAGCCGTT TTGGATAGGG CAGGGGAGCG GGTTCGTGAA GAGATCCGCG AAGAGATCAG CCAGGCTGCC TCAAGCGCAG CGTCCAACGC GCTCACCGAG CTTGCCCAAG CTGTCAACGA AGGCGTCCAC CAGCTGCTGA AGATCATGGT GGCGTGGATC ACCGATGTTG AGGCGGTGGA CCTGACGTCG GGATCTGCGG CTACCACGAT TGACCAGATG GGCTATTTGC TGTCCCCGGT CGTGCTGCTG GTAGGCGTTG TGGGGCTTTT GGTGGCGGCA GGCCGAATGG TGCTGACCCG CAAGGCCAAT CCCCTCATCC CGCTAGGCGG GGGCGTGCTC GTCGTCATCA TCGTGCAGGC CCTCGGTGTG GGAGTGGCCA ACCTTTTGCT GAGAGCGGGC GATGCCTGGT CGGTGTGGGT GCTGAACTCC ACGATGACCG AGCAGCTCGA AGACCGTTTG ATTCTGGTAA TGACCTTCGG TCAATACGAC GGTTCTGGCC CGGTCAGCGA GGATGGGGCC ACCCAAGCGG GCCTGACAGT CTCAGCGCTC CTGGTGATTC TACTAGGGAT CATCGTGCTC ATCGTCACGG TGATCCAAAT GATTCTGATG ATCTTCCGCG AGGCGGTGAT CATCATCCTG GCTGCCCTGC TGCCGTTGGC GGCTGTGGGC ATGATGATGC GGGCCACCCA AAGCTGGCTG CCGCGTGTGA GCAGTTGGAT GCTGGCTCTG ATTTTCTATA AGCCAGCTGT GGCAATGGTG TATGCCACGA CCTTTGTCTT CATTGGCGGC GATGAGCAGC CAACCATCCG CACCTTCATA GCCGGGCTGA TGATCGAAAT TCTTGGGCGC AGACCCCCGG CTTCAGCCGT GGGGTTAGCC CATCCCTCTC GATCCTCAGA CATTAGATAG
|
Protein sequence | MPALPLQPDI SECADLGTLY TNPIDCSRAV LDRAGERVRE EIREEISQAA SSAASNALTE LAQAVNEGVH QLLKIMVAWI TDVEAVDLTS GSAATTIDQM GYLLSPVVLL VGVVGLLVAA GRMVLTRKAN PLIPLGGGVL VVIIVQALGV GVANLLLRAG DAWSVWVLNS TMTEQLEDRL ILVMTFGQYD GSGPVSEDGA TQAGLTVSAL LVILLGIIVL IVTVIQMILM IFREAVIIIL AALLPLAAVG MMMRATQSWL PRVSSWMLAL IFYKPAVAMV YATTFVFIGG DEQPTIRTFI AGLMIEILGR RPPASAVGLA HPSRSSDIR
|
| |