| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1309 |
|---|
| Symbol | |
|---|
| ID | 3581755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 1520298 |
|---|
| End bp | 1521311 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637685006 |
|---|
| Product | putative transporter |
|---|
| Protein accession | YP_289370 |
|---|
| Protein GI | 72161713 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.442575 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACGT TCCGCTGGTC GGCAATCGGC TCGGCCGCAC TTGCGCTCAC CCTGTTCGCC
ACCGCCTGCG GCGGCGGCTC CTCCGCTGAC AGCGAAGGCG GAGACCTCGT GGAAGCGGCC
CAGAAGGAAG GCATCGTCAC CTGGTACGTC TCCATCCCTG ACGAGCCGGT GCAGGCCGTC
GCCAACGCCT TCGAGCAGGA GTACGGCATC GCCGTCGAAG TCGTCCGGAT GGGCTCCCCC
GTCGTGGCGC AGCGCTACTC CACCGAGCGC GACGCCGGAC AGGCCGTGGG CGACCTGGTC
ACCATCCCCG AAGCCCACGT GCTGGACGAG TACATCGAGA AGGGATGGCT CCGCACCCTC
CCGGCCGACC AGCTGGAGAA CCTGGACGAG TGGCCGGAAG AGGCCCTGCA CAAGGACACC
TACTTCCTGG TCAACTCCCA GCCCATCGGC GTGGCCTACA ACACCGACAA GCTGTCTGAG
GCACCACAAG ACTGGGAAGA CCTCCTCGAC CCCAAGCTGA AGGGCGAGAT CGACATGGCC
GACCCCATGT CGTTCCTCTC CTGGGCCGCC TTCCTGAGCA TCCTCAAGGA GGAGTACGGC
GAAGAGTTCC TGGAAGGCCT GGCCGACAAC GACATCAAGA AGGTGGACAG CGCCATCCCC
GGCACCCAGC AGGTGGCCGC AGGCGAGTCC ATCGCCACCT TCCCCAGCCT CCCCTCGGTG
GTGAACCCGC TGAAGGAATC CGGTGCCCCC GTGGAGCTGG TCTACCTCTC CCCCACCACG
GGAGTCGAGC AGTACACCGC CGTGTCTGAA GGCTCCCCGC ACCCGAATGC TGCGCTGCTG
TTCGCTGACT TCCTGATGTC CGAGAAGGGC CAGATCGCCC TCAACGAAGG CTTCGGTATC
TCCCCGCTGG GTGACCTGGC AGGCACCCTG CCCAAGCCTG AGGGCTACGT CGCTCCGGAC
CTTGCCACTG CCCGTGAGGA ACAAGAACAG CTCAACGCGC TGCTCGGCTT CTGA
|
|---|
| Protein sequence | MSTFRWSAIG SAALALTLFA TACGGGSSAD SEGGDLVEAA QKEGIVTWYV SIPDEPVQAV
ANAFEQEYGI AVEVVRMGSP VVAQRYSTER DAGQAVGDLV TIPEAHVLDE YIEKGWLRTL
PADQLENLDE WPEEALHKDT YFLVNSQPIG VAYNTDKLSE APQDWEDLLD PKLKGEIDMA
DPMSFLSWAA FLSILKEEYG EEFLEGLADN DIKKVDSAIP GTQQVAAGES IATFPSLPSV
VNPLKESGAP VELVYLSPTT GVEQYTAVSE GSPHPNAALL FADFLMSEKG QIALNEGFGI
SPLGDLAGTL PKPEGYVAPD LATAREEQEQ LNALLGF
|
|---|
| |