| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1302 |
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| Symbol | |
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| ID | 3580301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1510019 |
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| End bp | 1512097 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637684999 |
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| Product | 6-carboxyhexanoate--COA ligase |
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| Protein accession | YP_289363 |
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| Protein GI | 72161706 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1042] Acyl-CoA synthetase (NDP forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0303603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCTCG ATCTCAAACC GCTGATCAAC CCGGATTCGG TGGCCATCAT CGGCGCTTCA
CCCAACGAAG CCGGCCACGC TGGCCGCTGC CTGGCTAACC TCGAGCGGAC CGGCTACCCC
GGACGGATCT ACCCGGTCAA CCCCAAGTAC GACCGCATCG GCGCGCATAC CTGCTACCCC
TCCGCGCGCG ACCTCCCCGA ACAGGTGGAT GCGGCCTACC TGCTCGTTCC GGCCCGGGCC
GTGGAAAGCG CGCTTGAGGA CTGCCTGGAG CGCGGGATCC GCACGGTCAC CATCTGCTCG
GCGGGCTACG CCGAACTCGG CGCGGAAGGC GCCGAACGCC AGCGGCGCCT GGTCGAACGG
GCCCGGGAAC GCGGCGTCCG CATCCTCGGC CCCAACTGCA TCGGCGTGCT CAACCCCGTC
GACACCTACG TGGGCTGCCC CACCTTCAAC ATCACCTACT CCTACACGCC AGGCTCGATC
GCCCTGCTCA GCCAGAGCGG CGGAATGGCC GCCGCCCTGT TCAACCGGGC CCAAGGGCGC
ACCATCGGCA TCCGGACCAT GGTCAGCCTC GGCAACGAGG CCGACATCCA GATGGGCGAG
CTGCTCGACG CCTTCGTCGC CGACCCGCAG ACCCGGGTGA TCGCCATCTA CATCGAACAG
TTGCGCGACG CCGAACGGTT CGCAGCTGCG GCGGAACGCG CCCGCGCTGC CGGCAAGCCG
ATCGTGCTGC TCAAAGTCGG CGGTTCGGAA GCTGGACGGC GCACCGTCCT GGGACACACC
GGCGCAATGG CCGGGGAGCA GGCCGTGTTC TCCAGCATGA TGCGCCACCT GGGCGTGGTG
GAGGTCCACA GCATCGATGA CCTGCTCAAC ACCGCCTACG CGCTCAGCAG CCTCCCGCTG
CCCGCGGGGC CGCGCCTCGG TGCGCTCAGC CCCTCCGGCG GCGAGTGCGG CTACATCGCC
GACCGTGCCA GCGCGCACGG CCTGGAGATC CCCCTGCCCA CCCAGCAGAC CCTCGACGAA
CTGAGCGAGA AGCTGAAGCT GGCGCGTCCC GGCAACCCGC TCGACACCAC CGGCCAGGTC
ATCGGTGACG GTGCACTGCT CAGCGAACTC ATGCAGATCT TCACCGCCGA CCCGAACCTG
GACATGATCA CCCTGAGCAT CCCCACTTGG GGGCCCTACG ACTCCAACGC GCTGCTCCCG
CGGATCATCG ACGCTGTCAA AGCCTGCGAC AAGCCCGCCG TGCTCTCCGC GTGGACCGCG
CGCAACCTCA CCGAACGGGC TGAAGAACTG CTCCGCGAGT CCGGGATCTG CTGGTTCGCC
AGCTCGGACG AGGCCATCGC CGCGCTGGCC AACCTGCGGC GCTACGCCGA ACTCGCCCAG
GCCCCGTCGG CCACGCCTCC GGAACCGGTT TCCCTGCCCC GGCCCGAGGT CACGGAACTC
AACGAATACG CCGCCAAGCG GCTGCTCGCG GAAGGCGGGG TGCCGGTCGT CGCCGAAACC
CTCGCCCCCG ATACGGAAGC GGCCCTGCGC GCCGCCCGCG ACATCGACGG GCCGCTCGTC
GTGAAACTCG TCGCCTCCGG CGTGACCCAC AAGTCCGAGC TGGGACTGGT CCGCCTGCTC
GACCGGGCAG ACGAGGCCGA GGCCGCACTC GCCGACCTGG CCCGCGTCGC AGAGAAGGAG
AACCTCACCG TCGAAGGCTA CCTGGTGGCC GAGCGGCTCT CCGGAACCGA GATCATCCTC
GGCGCGGTTC GCGACGAGAC CTTCGGCCCG GTCCTCATGG TCGGGGCGGG CGGCATCCTC
GCCGAACACT TCGCCGACCG GGTCTTCCTG CCCTGCCCTG CCGCACCGGA GCACGTGCGC
GCCGCGCTCA AACAACTCGC CGTCTACCCG GTGCTCGACG GAGCCCGCGG ACGCCACCAC
GACGTGGACG CGCTGGTCGA TGTCGCAGTC GCGCTCTCCA GAGTCTTCGC GGGCAGCCCG
TGGATGACCG AAATCGACCT CAACCCGGTC ATCGTCGGCC TCAAAGGCCA GGGTGCGACC
GCAGTGGACG CCGTGATCGG AATCGCCCCC CAAGCCTGA
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| Protein sequence | MALDLKPLIN PDSVAIIGAS PNEAGHAGRC LANLERTGYP GRIYPVNPKY DRIGAHTCYP
SARDLPEQVD AAYLLVPARA VESALEDCLE RGIRTVTICS AGYAELGAEG AERQRRLVER
ARERGVRILG PNCIGVLNPV DTYVGCPTFN ITYSYTPGSI ALLSQSGGMA AALFNRAQGR
TIGIRTMVSL GNEADIQMGE LLDAFVADPQ TRVIAIYIEQ LRDAERFAAA AERARAAGKP
IVLLKVGGSE AGRRTVLGHT GAMAGEQAVF SSMMRHLGVV EVHSIDDLLN TAYALSSLPL
PAGPRLGALS PSGGECGYIA DRASAHGLEI PLPTQQTLDE LSEKLKLARP GNPLDTTGQV
IGDGALLSEL MQIFTADPNL DMITLSIPTW GPYDSNALLP RIIDAVKACD KPAVLSAWTA
RNLTERAEEL LRESGICWFA SSDEAIAALA NLRRYAELAQ APSATPPEPV SLPRPEVTEL
NEYAAKRLLA EGGVPVVAET LAPDTEAALR AARDIDGPLV VKLVASGVTH KSELGLVRLL
DRADEAEAAL ADLARVAEKE NLTVEGYLVA ERLSGTEIIL GAVRDETFGP VLMVGAGGIL
AEHFADRVFL PCPAAPEHVR AALKQLAVYP VLDGARGRHH DVDALVDVAV ALSRVFAGSP
WMTEIDLNPV IVGLKGQGAT AVDAVIGIAP QA
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