| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1295 |
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| Symbol | |
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| ID | 3580294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1502048 |
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| End bp | 1503550 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637684992 |
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| Product | putative membrane transport protein |
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| Protein accession | YP_289356 |
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| Protein GI | 72161699 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.345301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAGCAA CCCCGGCCGC AGTCCCCCAC ATCTCCCCAC TCCGGGTCAT CGTGCCGCTC
GTGTTGGGCG GCCTGACCTA TGCCATGTCG CAGAACGCGA TCGTCCCGGT CCTCGCGGAG
ATCCAGCGCG CCACCGGTTC CACGGCAAGC GAAGCGGCAT GGGTGGTCAC CGGTTTCTTC
ATCTCGTCCG CGGTGCTCAC CGTGATCGCC GGACGGCTGG GGGACCTGTT CGGCCGCAAG
CCGGTGCTGC TCATCTCCCT CGGCCTGTTC GCGCTCGGCG GGCTGATCGC CGCGGCAGGC
GGAACCCTGG GCGCAGTCGT GGCCGGGCGG GTGATCATGG GCGTGGCCGG CGGGGTCTTC
CCCTTGGCGT TTGCGCTGCT CGGGCAGCTG CTGCCCCGGG ACCGGGCCGC GTTCGGCATG
GGCCTGGTCA GCTCCATGCT CGGCCTGGGC GGTGCCCTGG GGCTGCCCGT GGGCGGCCTG
GTCGCCGAAT ACTTCGGCTA CCAGGGGCTC TTCTGGGGTT CGGCGGCTAT GGCCGCCGGC
TCCGTGGTCG CGATCGCGCT GCTGGTCCCG GAACCGCGTC GCCGCGGTCG CGGCCGGGTC
GACTGGATCG GCGCGACCCT GCTGACATTC TCACTGACGA CCGGCCTGCT CGCGGTGAGC
CGGGGCGCAG AGTGGGGTTG GTCGTCCACA CCGGTGCTGG CCCTGGCGGC CGTGGGGGTC
ATCGGACTGG TCGTCTTGCT AGGGGTGGAG CGGAGGATCC CCGATCCGCT GATCGACCTG
CGGTTGATGC GGCAGCGCAA CGTCTGGCTG GCCCACGTGA TCGGCTTCCT GACCACCTGC
GGGCAGATCA CCACGTTCCT GCTGGTGCCG CAGATGGTGC AGGCGCCCGC TGAGGGAGGA
ACCGGGCTGG GCGTGGGGGT GACCCAGGCG GGCCTGTACC TCCTGCCGTT CTCGATGACC
ACCCTGGTCG GGGGTGCGCT GACCGGGAAG GCCGTGGCCC GGTTCGGGAT CCGGCCCTTG
ATGGCACTGG GCGCGGCCTC CGCTGTCACC GGTCTGTCGA TCCTGGCGTT CCTCCCCGTG
CAGCCCGCCA CGGTCTTGCT CGGCGCGGGG ATCACCGGGA TCGGCGGCGG GACGATCTAC
AGCGCGTTGC CGGTGCTCAT CGCGGAAGCC GTGCCGGAAC GGGAGACCGG CACGGTCAAC
GGGATCAACA CCATCATCCG CACGATTGCC ATGGCGATCC TGTCGCAGGT GACCACGGTG
GTGCTGGTGG TGGGGACCCC GCCGGGCCAG GACTATCCGC TGCGGGCGGC GTTCACCGTC
GACTTCAGTA TGAGCGCGCT GCTCAACCTG CTGGCGCTGC TCCTGGTGCC GTGCATCGTG
GTGGCCGGGG CCCGCCGCGG CCGGGGAGGC GGTAAGGCGG ATGCGCACCC GAAGGCTGCC
GCGGTCAGGC GGGAGGAACC GGCCGCGGAG GAGAGCGAAC AGCGGAGCTG GCCACCCTCC
TGA
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| Protein sequence | MAATPAAVPH ISPLRVIVPL VLGGLTYAMS QNAIVPVLAE IQRATGSTAS EAAWVVTGFF
ISSAVLTVIA GRLGDLFGRK PVLLISLGLF ALGGLIAAAG GTLGAVVAGR VIMGVAGGVF
PLAFALLGQL LPRDRAAFGM GLVSSMLGLG GALGLPVGGL VAEYFGYQGL FWGSAAMAAG
SVVAIALLVP EPRRRGRGRV DWIGATLLTF SLTTGLLAVS RGAEWGWSST PVLALAAVGV
IGLVVLLGVE RRIPDPLIDL RLMRQRNVWL AHVIGFLTTC GQITTFLLVP QMVQAPAEGG
TGLGVGVTQA GLYLLPFSMT TLVGGALTGK AVARFGIRPL MALGAASAVT GLSILAFLPV
QPATVLLGAG ITGIGGGTIY SALPVLIAEA VPERETGTVN GINTIIRTIA MAILSQVTTV
VLVVGTPPGQ DYPLRAAFTV DFSMSALLNL LALLLVPCIV VAGARRGRGG GKADAHPKAA
AVRREEPAAE ESEQRSWPPS
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