| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1290 |
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| Symbol | |
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| ID | 3580289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1497370 |
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| End bp | 1498548 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637684987 |
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| Product | branched chain amino acid ABC transporter permease |
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| Protein accession | YP_289351 |
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| Protein GI | 72161694 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.169952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATGC GCAAGAGCTG GTCCCGCACC CTGCTCGCCG CCACCGGAGC CACAGCGCTG
CTCGCCGCGG CCGCCTGCGG CACCAACGAG GCGGGAGAAA GCAGCTCCAC GGGAGAGGGG
CTGCCGGACA CCATCAAGAT CATGTCCATC AAGGAGATGA CCGGCCCCGT CTCCTTCGCA
GGTGAGAACA GCACCAAGGG CATCGACCTG GCGGTCGAAC AGATCAACGA ACAAGGCTTC
CTGGGCGACA CCAAGCTGGA GATCGACCTC AAGGACGCCT CGGACAGCAC CCAGGAGGCT
GCCAGCCTCG CCACCCAGGC CGTCTCGGAC AAGTCCTACT CCGCGATCCT CGGCCCCGGC
CTGAGCAGCC AGGCTTCCGC GATCTCCCCG ATCGCAGAAA AAGGCGAGAT CCCGGTCATC
TACTACCAGG CGGGAAGCGA CGGTGTCCTC GTAGGCGACT ACACCTACCG CGTGACCGCT
CCGGCCGCCT CCTACTACCA CATCATCGGC GACTACCTGG CCGAGAAGAA GGTGAAGACC
GCCGCCGTCC TCTACACCAG CGGCAACCCC ACCCTCACCG AGCTCGGTGA GAAGGCGGTT
CCCGGGGTGA TCGAGGAGAA CGGTGTCACC ATCAAGCGCT CCGACACGGT GAGCAACGAC
ACCCAGGACT TCACCGCCGT CACCTCCGAG ATCATCAAGG CCGACCCCGA CGCTGTCTTC
CTCCTGCTGC TCGGCCCGCA GAACCCCCGT GCGGTGAGCC AGCTCAAGCA GAAGGGCTAC
GACGGCGAGA TCATCGGCAT GACCACCATG GGCGCCGGCA ACCTGGAGAC CGCCGGTGAG
GACGCCGCAG GCGTGGTGTG GCCCAGCAAC TTCAGCGCCC GCAGCGAAGT CCCCTCTACC
CAGGAATTCG TCAAGGCCTA CGAAGAGAAG TACGGCGAGC TGCCCAACAA CTACGCCGCC
GAAGGCTACG ACGCCGTGTG GCTGCTGGCC CGCGGCATCA AGGAAGCCAA CAGCGCCGAC
CGAGTCGCTA TCCGGGAAGG CATCGCCAAG GTTGCCGCTG AAGGCTTCGA CGGCGCACAA
GGCCCCCTCA GCTTCGAGAA CAACGACGTC CGTGTCGAGG GCGTGATCGC CAGCTGGAAC
GGCTCCGAGG AAGTCGTCGT CACGCTGGGT GATGACTGA
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| Protein sequence | MNMRKSWSRT LLAATGATAL LAAAACGTNE AGESSSTGEG LPDTIKIMSI KEMTGPVSFA
GENSTKGIDL AVEQINEQGF LGDTKLEIDL KDASDSTQEA ASLATQAVSD KSYSAILGPG
LSSQASAISP IAEKGEIPVI YYQAGSDGVL VGDYTYRVTA PAASYYHIIG DYLAEKKVKT
AAVLYTSGNP TLTELGEKAV PGVIEENGVT IKRSDTVSND TQDFTAVTSE IIKADPDAVF
LLLLGPQNPR AVSQLKQKGY DGEIIGMTTM GAGNLETAGE DAAGVVWPSN FSARSEVPST
QEFVKAYEEK YGELPNNYAA EGYDAVWLLA RGIKEANSAD RVAIREGIAK VAAEGFDGAQ
GPLSFENNDV RVEGVIASWN GSEEVVVTLG DD
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