Gene Tfu_1244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1244 
Symbol 
ID3581008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp1448285 
End bp1449832 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content65% 
IMG OID637684941 
Producthelix-hairpin-helix DNA-binding motif-containing protein 
Protein accessionYP_289305 
Protein GI72161648 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACCGAT TCTCCCCCAA AGGGGATCCT GAATCCGACA ACGTGTCCAG CCGTCTCTCA 
CTCGCGGAGG AGGAACCGGT GCCTCGACCC CCCAAGCCGC TGCGGCCTGA GCGGTCCCCC
GCCGACTGGT TCGGCGCGGA GCTGCGGTAC TGGCGTGAAC ACCGGAAACT GACTCAGCGG
GAACTCGCGC AACGTGTATG GGTCAGCACG AGTCTGGTTG GACGCATCGA AGTCGCGGAA
CGCTCCTGCC CACCCGATTT AGCGCGACGT TTCGACGAAG TTCTCGAAAC CGGGGGAGTG
CTCAGCCGCG CGCTGCGTTT GATCAATGCA ACCGAAGGGG ATTCCGACAC AAAGTCAGAG
AAGGGCGGAA AAACGGCCGA TCCCCCAGCC AGAAATCCGC TCTCCGGGTC TTCCCGTGAC
CTGTGCCCGG CAGCGGGAAC GATCCGTGAC ATCGCTGAAA CCACGGTGAA TGACCTGATG
AAACGCAGAG ACGCGCTGGC AGCAGGCGGT GCGCTAGTCG TCGGAACGGC GCTGACAGAA
ACATTGGAAC GCTGGCTGGT TCCCCTCCGC AAACCAGTCA CGCGGCAATC CGGCGCCCCA
GAGGAAACAG AGCTCGAACG GATCGAAGCC GGAGTAGCCG CCTTGCGGCA CTGGGATGAC
CGGTGGCGGC TGGGCATCAG CCGCAAAGCC GTGGTGGCCC AGTTGTCCGA GGTCGCAGAC
ATGGCTGGAG AGATCCGGTC CGCAGCAATC CAACCCCGCC TCTTCCTCGC CATGGCCGAG
CTTTCCCGCA TTGCGGCGGC AATGTCCTAT GACGAGGGCG ACCACCCCAG CGCACAGAAG
TACTACACGC TCTCCCTGCG CGCCGCACAC CAGGCAGGAC CGGACTACGA GCTGTACGGG
GTGGGAGTGC TCGCCGATAT GGCCCGGCAG ATGCTTGACC TGCACCGGCC CCAAGACGCG
TTGGAGATCT CCCGGCTCGC GTTGGACGGG GCGCGCACCC GCAAAGCACC CCCCGCGATG
ATGTCCATGC TCTACACCCG GGAAGGCTGG GCCTATGCCC GGATGGGACG CGTCCAGGCC
TACCGGCGGA CAGTCGCGCA GGCAGAAGAA ATGCTCGAAA ACGACACTGC GGAGCCGCTC
CCCGAATGGG TGCGGACCAT CGACCGCGCA GAACTGTCCG GGGTGGTGGG CGCACGCTAC
CGGGACCTCG CGCAAAACCA AGACGATCCG GCAGCGAAAC GGAAGAACGC CGAAGAGGCA
CTCCACTACA TCACGCAGGC ACTGGAGCTG CGGCCGCCCA CCCGGCGCCG CAACCAGGCA
TTCGACCTCA TCGGCCTGGG GCGCACCTAT CTGCTGCTCA ACGAGCCGGT AGAGGCCGCC
AATGCGGTCT GTAATGCTGT AGCCGTCGCA GGAGGGCTGA GGTCAGGCCG GGTACGGCGG
CGCCTCCAGG ACTGGTATCG GGAAGCCGAA CCGTTCCGCA GGGAACCGGT GGTGGCGGAA
CTACGCGAGG AATTGTCCCG TACGCTCCTG GCCAAGAGTC AAACGTGA
 
Protein sequence
MDRFSPKGDP ESDNVSSRLS LAEEEPVPRP PKPLRPERSP ADWFGAELRY WREHRKLTQR 
ELAQRVWVST SLVGRIEVAE RSCPPDLARR FDEVLETGGV LSRALRLINA TEGDSDTKSE
KGGKTADPPA RNPLSGSSRD LCPAAGTIRD IAETTVNDLM KRRDALAAGG ALVVGTALTE
TLERWLVPLR KPVTRQSGAP EETELERIEA GVAALRHWDD RWRLGISRKA VVAQLSEVAD
MAGEIRSAAI QPRLFLAMAE LSRIAAAMSY DEGDHPSAQK YYTLSLRAAH QAGPDYELYG
VGVLADMARQ MLDLHRPQDA LEISRLALDG ARTRKAPPAM MSMLYTREGW AYARMGRVQA
YRRTVAQAEE MLENDTAEPL PEWVRTIDRA ELSGVVGARY RDLAQNQDDP AAKRKNAEEA
LHYITQALEL RPPTRRRNQA FDLIGLGRTY LLLNEPVEAA NAVCNAVAVA GGLRSGRVRR
RLQDWYREAE PFRREPVVAE LREELSRTLL AKSQT