| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1201 |
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| Symbol | xerD |
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| ID | 3580144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1403584 |
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| End bp | 1404549 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637684897 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | YP_289262 |
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| Protein GI | 72161605 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.731595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGAGC AGGCGTCTCG TCTTCACACA GCGGTACGCG GATACCTCGA CCACTTGACT
GTGGAACGCG GGCTCGCCGC CAACACCCTC CAGTCCTACC GCCGGGACCT CAACCGCTAC
CTGGACTTCC TCACCGCCCG CGGCATCACC GACCTGCGCG ACGTCCGCGC CGACGACGTC
GCCTCCTTCC TGCGCACCCT GCGGGAAGGC GACGCCCACC ACCGGCCTTT GGGCGCCAAC
TCCGCGGGAC GAGCCGTGAT CGCAGTCCGC GGCCTGCACC GGTTCGCGCT CCGCGAAGGA
CTCACCGCCC ACGACCCCGC CCACGAGGTA CGGCCCCCCG CCCTCCAGCG CAGACTCCCC
AAAGCCATCA CCGTGGCCCA AGTGGAGGCG CTGCTCGCCG CAGCCGACAT CGGAGGCGGT
CCGCGCGCAC TGCGGGACCG CGCCCTCATA GAACTGCTGT ACGGCACGGG GGCGCGGATC
TCCGAAGTCG TCGGCCTGGA CGTGGACGAC GTCACCCGGC TGCGCCCCGA CCCGCACGCC
GACACCGAAG TCGCGGCGGT GCGGTTCCGC GGCAAAGGCG GTAAAGAGCG CATCGTGCCG
GTCGGCCGGT ATGCGCGCAC CGCTGTAGAC GCCTACCTGG TGCGGGCCCG TCCCGGGCTC
GCCGCTGCCG GACGCGGCAG CAGCGCCCTG TTCCTCAACG CCCGCGGAGG CAGGCTGACC
CGGCAGGGTG CGTGGGCGGT ACTGCACGCC GCCGCTGAAC GGGCCGGCCT CCGCGATGTG
TCCCCGCACA CCTTGCGCCA CTCGTTCGCC ACCCACCTCA TCGACGGGGG CGCGGACGTG
CGCGTCGTCC AAGAGCTTTT AGGGCACGCC TCCGTCACCA CGACGCAGGT CTACACCCTC
GTCACCGTGG ACCGGCTGCG GGAGGTGTAC GCTGCAGCAC ATCCCCGGGC GCGAGTGTCG
CGTTGA
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| Protein sequence | MPEQASRLHT AVRGYLDHLT VERGLAANTL QSYRRDLNRY LDFLTARGIT DLRDVRADDV
ASFLRTLREG DAHHRPLGAN SAGRAVIAVR GLHRFALREG LTAHDPAHEV RPPALQRRLP
KAITVAQVEA LLAAADIGGG PRALRDRALI ELLYGTGARI SEVVGLDVDD VTRLRPDPHA
DTEVAAVRFR GKGGKERIVP VGRYARTAVD AYLVRARPGL AAAGRGSSAL FLNARGGRLT
RQGAWAVLHA AAERAGLRDV SPHTLRHSFA THLIDGGADV RVVQELLGHA SVTTTQVYTL
VTVDRLREVY AAAHPRARVS R
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