Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1195 |
Symbol | |
ID | 3580138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1393769 |
End bp | 1396111 |
Gene Length | 2343 bp |
Protein Length | 780 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637684891 |
Product | putative regulator |
Protein accession | YP_289256 |
Protein GI | 72161599 |
COG category | [R] General function prediction only |
COG ID | [COG3903] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGTCC GGGCCTGTGC CGCATACGCC CGAGCCCATC CCGAGCAGGC GGTCGGCAGC GCAGAGGCAT GGGAGGAAGC CGCTCTGCTC GAACAGTGGC GGCAGCGGTG GTATGAAGCC CGCAACGAAC AGGCCGCTAC GCAGCAGAGC CCCACCTCTG TGGGGGCCGA CCCGGAACCC GGCTACGCCA CGACGGCGTT TGCCACCGGA ACCCTGCCAG CCGAGGTCAC GTCGTTCGTA GGCCGCAAAA CCGACCTGGC CGCGGTAGAG GAGCGGCTCG CCCACGGCGG GACGGTCACC CTCGTCGGCA CAGGGGGAGT AGGCAAGACC AGGCTCGCCC TGCACGTAGC CCGCCGGGTG TGCGACCGTT ACCGGGACGG CGTGGGGCTC GTCGAATTGG CGTCGGTCAC CGATCCGCAG GCCGTGGTGT GGACTGTGGG AGCAGCACTG CGGATCCCGG ACGGCTCCGC AGACGCGTCC GCGGACACGC TGGCCGCAGC CCTCGCCGAC CGGGAACTTC TTCTGCTCCT CGACAATTGC GAGCACCTGG TGGAGAGCTG TGCGGTCCTG GTGGAGACTC TGCGGCGGCG GGCGCCCGGC GTGCAGATCC TGGCCACCAG CCGACGCCCG CTGGGCTGTG CAGGGGAGCA GCTCTGGCAG GTGCACCCCC TGTCCGTGCC TGGGTCCGCC ACCCCGCTGG AGCACCTGAC ACGGTACGAG TCGGTCGAAC TGCTGGTGGA CCGGGCCGCA GCGGTGGTCC CGGGCTTCAC GGTGGACGAG GACAACCACC GGGCGGTGAT CCGGCTGTGC CAATTGCTCG AGGGGGTGCC GCTGCTGGTG GAACTGGCCG CCCGCGGACT GCGGGTCCTC TCCCCGCGGC AGTTGCTGGA GCGGTTGGAG GAGGGACTGT CCCTGCCGGA CAGTTCGGTG CGCACCGCCC CGGACCGGCA CCGGACGCTG CGCGCAGTGC TGGACTGGAG CTACGGGCTG TGCACTCCGG ACGAGCGGCG GGCCTGGGCC CGGCTTTCAA TCTTCGGTGG GGACTTCACG TTGGAGGGCG CCGAAGCAGT CCTGGCCGAG GCCGGCTGGG AGACAGACAA GGCGCTCCAC GCGGTCACCG GTCTTGTGGA CCAGTCGGTG CTGACCGCCT ACGACGCTGA AGGGCAACGG TACTACCGGA TGCTGGAACC GGTGCGGCGC TACGGCCGGG ACCGGTTAGC GGAGAGCGGA ACCGCAGAGG AGACGCGCCG TCGGCTCCGC GACTGGTATC TGACCCTGGT GGAGCGCGCG GAGAGCGCGT GGAGCGGTGC CGGGCAGGCA CTCTGGTTCC GGCGGCTCCG CCGCGGCCAC GCCGACCTGA AAGTGGCGCT GCGCGCAGGG CTCGACGATC CCGCGACCGT CCGTCGCACG CTGCGGGCTA TGGGCACTCT GTGGCCGTAC TGGATGCTGT GCGTGCCGCT CAGTGAGAGC CGCCACTGGT TGGAGCTGGG GCTGCAGCGG TGCCAGGAGC CCGGGCCGGA ACGAGACAAA GCGTTGTGGG TGTGCGGGTT CGTCGCGGTA CTCCAGCGGG ACCTCGATAC GGTGGACCGC TGCGCCCGCG AGATCGAACA GGAAGGAACA GGCGGGACGC GGACAGAATC CGATGCGGCC CTGCTGCGCA GCCTGGCGGC GCTCTCCTGG GCGGAAGCGG GCACCGCGCG CGCCAAGGCA CTGCGGGCGC TGCAGGGGTA TCGCCGCCAC GGTGACGAGT TCGGGGAGCA GGTCACTCTC GGGCTGCTCA CTTTGATCGG CGAGGGGGAC CAGGCGACGG TAGCGGAGTA CCACCGGAAA GCGGTGGAGC TGAGCCTACG CCGCGGGGAA CGGTGGCACC GCTCCTATCT GCTGTCCACG TTCGGGATCT ACCTCTGGCG GCAGGGCGAG GCCGATGAGG CGGCCGCCCA CTTGGTGCGC AGCCTGGAGA TCAGCGCAGA GTTCGACGAC CGGCTGGGCG GCGCGATGGC GGTGAACGCG CTCGCGTGGA TTCTGGCGGA GCATGGAGAC CCCGGGCTCG CGGCCCGCCT GCTGGGAGCG GCCCGGACTT TGCTGGGCGG GGGCGTTCCC CAACTGTTCG GGTTTCCCCA ACTGCTGTGG GAGCACCGGC GCTGCGCGGC GCGGCTCCGT GCCGAGTTGG GTGCGGACGG GGTGGCTCGG GCACGCGAGG AGGGGGCACG GCTGGGGCTT GCGGAGATCG TGCGTCTCCT CCACGAGTCC GGTCTTCCGG CCTGCGGGGG TGGATCCGTT GCGAGGACGG GGGAAGGGGA CGGCGAGCTG GCTGGGGGCG CCGCCCTGGG CTGCGCACGG TGA
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Protein sequence | MFVRACAAYA RAHPEQAVGS AEAWEEAALL EQWRQRWYEA RNEQAATQQS PTSVGADPEP GYATTAFATG TLPAEVTSFV GRKTDLAAVE ERLAHGGTVT LVGTGGVGKT RLALHVARRV CDRYRDGVGL VELASVTDPQ AVVWTVGAAL RIPDGSADAS ADTLAAALAD RELLLLLDNC EHLVESCAVL VETLRRRAPG VQILATSRRP LGCAGEQLWQ VHPLSVPGSA TPLEHLTRYE SVELLVDRAA AVVPGFTVDE DNHRAVIRLC QLLEGVPLLV ELAARGLRVL SPRQLLERLE EGLSLPDSSV RTAPDRHRTL RAVLDWSYGL CTPDERRAWA RLSIFGGDFT LEGAEAVLAE AGWETDKALH AVTGLVDQSV LTAYDAEGQR YYRMLEPVRR YGRDRLAESG TAEETRRRLR DWYLTLVERA ESAWSGAGQA LWFRRLRRGH ADLKVALRAG LDDPATVRRT LRAMGTLWPY WMLCVPLSES RHWLELGLQR CQEPGPERDK ALWVCGFVAV LQRDLDTVDR CAREIEQEGT GGTRTESDAA LLRSLAALSW AEAGTARAKA LRALQGYRRH GDEFGEQVTL GLLTLIGEGD QATVAEYHRK AVELSLRRGE RWHRSYLLST FGIYLWRQGE ADEAAAHLVR SLEISAEFDD RLGGAMAVNA LAWILAEHGD PGLAARLLGA ARTLLGGGVP QLFGFPQLLW EHRRCAARLR AELGADGVAR AREEGARLGL AEIVRLLHES GLPACGGGSV ARTGEGDGEL AGGAALGCAR
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