| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1164 |
|---|
| Symbol | trpC |
|---|
| ID | 3580848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 1354914 |
|---|
| End bp | 1355720 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637684859 |
|---|
| Product | indole-3-glycerol-phosphate synthase |
|---|
| Protein accession | YP_289225 |
|---|
| Protein GI | 72161568 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGTGC TCGACGAGAT CATCGACGGA GTGCGCGCGG ACCTCGCGGA ACGCCAGGCC
GCCGTGCCCT TGGATAAGCT CAAAGAGCAG GCCGCGGCCC TACCGTGGCC CAAGGACGTG
GTGGCGGCGC TACGCGCTCC CGGAGTCCAG GTCATCGCCG AGGTGAAGCG CTCCAGCCCT
TCCAAGGGCG CTCTCGCCGC GATCGCTGAC CCCGCCGCGC TGGCACGCGA CTACGCCGCG
GGCGGCGCCT GCATGATCAG CGTCCTGACC GAGCAGCGCC GTTTTGCCGG CAGCCTGGCC
GACCTGGCGG CGGTCCGCGC CGCTGTGGAC ACGCCGCTGC TGCGCAAGGA CTTCGTGGTC
AGCTCCTACC AGTTGTGGGA GGCGCGGGTC TACGGTGCGG ACGCGGTCCT CCTCATCGTG
GCTGCGCTGT CCCAGGACGC CCTGGTCTCC CTGGTGGAGC GGGCCGAATC CCTCGGGTTG
ACTCCGCTCG TCGAAGTGCA CACCGAAGAA GAGGTCGAAC GTGCCTTGGA CGCCGGAGCC
ACGGTGATCG GTGTCAACGC CCGGGACCTG AAGACCTTGA AGGTCGACCG CGGCACTTTT
GCCCGGTTGG CTCCGCTGAT CCCCGACGAC AAGATCAAGA TCGCCGAGTC GGGGGTGCGC
GGACCCCACG ACCTGCTCGC CTACGCGAGC GCGGGAGCCG ACGCCGTCCT GGTGGGGGAG
AGCCTGGTCA TCGGACGCAA ACCCCGCGAG GCCGTTGCCG ACCTGGTCAC GGCAGGTGCC
CACCCCGCGC TGCGGGACCG GCACTGA
|
|---|
| Protein sequence | MSVLDEIIDG VRADLAERQA AVPLDKLKEQ AAALPWPKDV VAALRAPGVQ VIAEVKRSSP
SKGALAAIAD PAALARDYAA GGACMISVLT EQRRFAGSLA DLAAVRAAVD TPLLRKDFVV
SSYQLWEARV YGADAVLLIV AALSQDALVS LVERAESLGL TPLVEVHTEE EVERALDAGA
TVIGVNARDL KTLKVDRGTF ARLAPLIPDD KIKIAESGVR GPHDLLAYAS AGADAVLVGE
SLVIGRKPRE AVADLVTAGA HPALRDRH
|
|---|
| |