| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1122 |
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| Symbol | |
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| ID | 3579324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1309313 |
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| End bp | 1309861 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637684817 |
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| Product | signal peptidase II |
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| Protein accession | YP_289183 |
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| Protein GI | 72161526 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.186088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGTTGCCG ACTTCGTCAC CAAGGAGATC GCGCTCGCGT ACTTCTCCCC CCGCGACCCG
ATCGTGCTTC TCGGCGGCCT GCTCAAGCTG ACACTCGTGT TCAACCCGGG GGCAGCGTTC
TCCATCGGTA CCGGGATGAC CTGGGTGTTC AGCCTGATCA TGGTGGCGGT CATCGGCACC
ATCCTGTGGA CGGCACCTCG GCTGCGCAGC GCCGGATGGG CGGTGTCGCT GGGGTTGATC
CTCAGTGGCG CCATAGGCAA TTTCATCGAC CGCGTGTGGC GTCCCGACAC TCGGGAGATA
CCGGCGGCAC TCGTGGGTCC GGACGCGCCA GGGACGTGGG TGGACCGGCT GTTCCATCCG
CCGTCCCCGT TGCACGGTCA CGTCGTGGAC TGGATTCAGG TGCCCTACTG GCCGGTGTTC
AACATCGCCG ACTCCGCGAT CGTGTGCGGC GGTGTCCTCG CCGTGCTGTT GGCTTTCCGT
GGGATCAACA TTGACGGCAC GCGCGAGACA GACGACAAAC GCGGTGCGAC GCGAGGAGAC
GAAGCGTGA
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| Protein sequence | MVADFVTKEI ALAYFSPRDP IVLLGGLLKL TLVFNPGAAF SIGTGMTWVF SLIMVAVIGT
ILWTAPRLRS AGWAVSLGLI LSGAIGNFID RVWRPDTREI PAALVGPDAP GTWVDRLFHP
PSPLHGHVVD WIQVPYWPVF NIADSAIVCG GVLAVLLAFR GINIDGTRET DDKRGATRGD
EA
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